gnu.trove3;bundle-version="3.0.3",
org.simantics.layer0;bundle-version="1.0.0",
org.slf4j.api;bundle-version="1.7.2"
-Export-Package: org.simantics.graph.db,
- org.simantics.graph.db.old
+Export-Package: org.simantics.graph.db
Bundle-Vendor: VTT Technical Research Centre of Finland
+++ /dev/null
-package org.simantics.graph.db.old;
-
-import java.util.Set;
-
-import org.simantics.db.exception.DatabaseException;
-
-public class OldMissingDependencyException extends DatabaseException {
-
- private static final long serialVersionUID = -1579450497603555931L;
-
- private final OldTransferableGraphImportProcess1 process;
-
- public OldMissingDependencyException(OldTransferableGraphImportProcess1 process) {
- super(createMessage(process));
- this.process = process;
- }
-
- private static String createMessage(OldTransferableGraphImportProcess1 process) {
- StringBuilder b = new StringBuilder();
- b.append("The following references were not found:\r\n");
- for(String missing : process.missingExternals) {
- b.append(" -" + missing + "\r\n");
- }
- return b.toString();
- }
-
- public Set<String> getMissingURIs() {
- return process.missingExternals;
- }
-
-}
+++ /dev/null
-package org.simantics.graph.db.old;
-
-import java.io.DataOutput;
-import java.io.DataOutputStream;
-import java.io.FileNotFoundException;
-import java.io.FileOutputStream;
-import java.io.IOException;
-import java.util.HashSet;
-import java.util.Map;
-import java.util.Set;
-
-import org.simantics.databoard.Bindings;
-import org.simantics.databoard.adapter.AdaptException;
-import org.simantics.databoard.binding.mutable.Variant;
-import org.simantics.db.ReadGraph;
-import org.simantics.db.Resource;
-import org.simantics.db.VirtualGraph;
-import org.simantics.db.WriteOnlyGraph;
-import org.simantics.db.common.WriteBindings;
-import org.simantics.db.common.procedure.adapter.TransientCacheAsyncListener;
-import org.simantics.db.common.uri.UnescapedChildMapOfResource;
-import org.simantics.db.common.utils.Logger;
-import org.simantics.db.exception.DatabaseException;
-import org.simantics.db.exception.ResourceNotFoundException;
-import org.simantics.db.service.ClusterBuilder;
-import org.simantics.db.service.ClusterBuilder.ResourceHandle;
-import org.simantics.db.service.SerialisationSupport;
-import org.simantics.db.service.TransferableGraphSupport;
-import org.simantics.graph.db.CoreInitialization;
-import org.simantics.graph.db.IImportAdvisor;
-import org.simantics.graph.representation.Extensions;
-import org.simantics.graph.representation.External;
-import org.simantics.graph.representation.Identity;
-import org.simantics.graph.representation.IdentityDefinition;
-import org.simantics.graph.representation.Internal;
-import org.simantics.graph.representation.Optional;
-import org.simantics.graph.representation.Root;
-import org.simantics.graph.representation.TransferableGraphUtils;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
-import org.simantics.graph.representation.old.OldValue1;
-
-public class OldTransferableGraphImportProcess1 {
-
- public static String LOG_FILE = "transferableGraphs.log";
- final static private boolean LOG = false;
-
- static DataOutput log;
-
- static {
-
- if (LOG) {
- try {
- FileOutputStream stream = new FileOutputStream(LOG_FILE);
- log = new DataOutputStream(stream);
- } catch (FileNotFoundException e) {
- e.printStackTrace();
- }
- }
-
- }
-
- private static void log(String line) {
- if (LOG) {
- try {
- log.writeUTF(line + "\n");
- } catch (IOException e) {
- e.printStackTrace();
- }
- }
- }
-
- OldTransferableGraph1 tg;
- IImportAdvisor advisor;
-
- Resource[] resources;
- ResourceHandle[] handles;
-
- Set<String> missingExternals = new HashSet<String>();
-
- // Builtins
- Resource RootLibrary;
- Resource String;
- Resource Library;
-
- Resource InstanceOf;
- Resource ConsistsOf;
- Resource PartOf;
- Resource HasName;
- Resource NameOf;
-
- public OldTransferableGraphImportProcess1(OldTransferableGraph1 tg, IImportAdvisor advisor) {
- this.tg = tg;
- this.advisor = advisor;
- /*System.out.println("Transferable graph identities:");
- for(Identity id : tg.identities) {
- if(id.definition instanceof Internal) {
- Internal def = (Internal)id.definition;
- System.out.println(" internal " + def.name);
- }
- else if(id.definition instanceof External) {
- External def = (External)id.definition;
- System.out.println(" external " + def.name);
- }
- }*/
- }
-
- public void findBuiltins(WriteOnlyGraph g) throws DatabaseException {
- RootLibrary = g.getBuiltin("http:/");
- String = g.getBuiltin(CoreInitialization.LAYER0 + "String");
- Library = g.getBuiltin(CoreInitialization.LAYER0 + "Library");
- InstanceOf = g.getBuiltin(CoreInitialization.LAYER0 + "InstanceOf");
- ConsistsOf = g.getBuiltin(CoreInitialization.LAYER0 + "ConsistsOf");
- PartOf = g.getBuiltin(CoreInitialization.LAYER0 + "PartOf");
- HasName = g.getBuiltin(CoreInitialization.LAYER0 + "HasName");
- NameOf = g.getBuiltin(CoreInitialization.LAYER0 + "NameOf");
- }
-
- public void findBuiltins(ReadGraph g) throws DatabaseException {
- RootLibrary = g.getBuiltin("http:/");
- String = g.getBuiltin(CoreInitialization.LAYER0 + "String");
- Library = g.getBuiltin(CoreInitialization.LAYER0 + "Library");
- InstanceOf = g.getBuiltin(CoreInitialization.LAYER0 + "InstanceOf");
- ConsistsOf = g.getBuiltin(CoreInitialization.LAYER0 + "ConsistsOf");
- PartOf = g.getBuiltin(CoreInitialization.LAYER0 + "PartOf");
- HasName = g.getBuiltin(CoreInitialization.LAYER0 + "HasName");
- NameOf = g.getBuiltin(CoreInitialization.LAYER0 + "NameOf");
- }
-
- /* Preparation that is used when the core is empty.
- */
- void initialPrepare(WriteOnlyGraph graph) throws DatabaseException {
- findBuiltins(graph);
-
- resources = new Resource[tg.resourceCount];
-
- int Root = -1;
- int SimanticsDomain = -1;
- int Layer0 = -1;
-
- for(Identity identity : tg.identities) {
- if(identity.definition instanceof Internal) {
- Internal def = (Internal)identity.definition;
- Resource res = null;
- if(def.parent == Layer0) {
- try {
- res = graph.getBuiltin(CoreInitialization.LAYER0 + def.name);
- } catch(ResourceNotFoundException e) {
- }
- }
- else if(def.parent == SimanticsDomain) {
- if(def.name.equals("Layer0-1.1"))
- Layer0 = identity.resource;
- }
- else if(def.parent == Root) {
- if(def.name.equals("www.simantics.org"))
- SimanticsDomain = identity.resource;
- }
-
- if(res == null)
- res = createChild(graph, resources[def.parent], def.name);
- else
- createChild(graph, res, resources[def.parent], def.name);
- resources[identity.resource] = res;
- }
- else if(identity.definition instanceof Root) {
- Root = identity.resource;
- resources[identity.resource] = RootLibrary;
- }
- }
- }
-
- void addMissing(String external) {
- Set<String> removals = new HashSet<String>();
- for(String ext : missingExternals) if(ext.startsWith(external)) return;
- for(String ext : missingExternals) if(external.startsWith(ext)) removals.add(ext);
- missingExternals.removeAll(removals);
- missingExternals.add(external);
- }
-
- void prepare(ReadGraph graph) throws DatabaseException {
- findBuiltins(graph);
-
- Resource[] resources = new Resource[tg.resourceCount];
-
- for(Identity identity : tg.identities) {
- IdentityDefinition definition = identity.definition;
- if(definition instanceof External) {
- External def = (External)definition;
- if(def.parent == -1) {
- resources[identity.resource] = RootLibrary;
- } else {
- if("@inverse".equals(def.name)) {
- Resource parent = resources[def.parent];
- Resource child = graph.getInverse(parent);
- resources[identity.resource] = child;
- } else {
- Resource parent = resources[def.parent];
- // TODO: escape should be removed when names become well-behaving
- if(parent != null) {
- Resource child = graph
- .syncRequest(new UnescapedChildMapOfResource(parent),
- new TransientCacheAsyncListener<Map<String, Resource>>())
- .get(def.name);
- if(child == null) {
- addMissing(graph.getURI(parent) + "/" + def.name);
- }
- resources[identity.resource] = child;
- } else {
- addMissing(TransferableGraphUtils.getURI(tg.resourceCount, tg.identities, def.parent) + "/" + def.name);
- }
- }
- }
- }
- else if(definition instanceof Internal) {
- // Do not do anything for now
- }
- else if(definition instanceof Root) {
- Root root = (Root)definition;
- if(root.name.equals(""))
- resources[identity.resource] = RootLibrary;
- else
- advisor.analyzeRoot(graph, root);
- }
- else if(definition instanceof Optional) {
- External def = (External)definition;
- Resource parent = resources[def.parent];
- if(parent != null)
- resources[identity.resource] =
- graph.syncRequest(new UnescapedChildMapOfResource(parent)).get(def.name);
- }
- }
-
- this.resources = resources;
-
- if(!missingExternals.isEmpty()) throw new OldMissingDependencyException(this);
-
- }
-
- Resource createChild(WriteOnlyGraph graph, Resource parent, String name) throws DatabaseException {
- Resource child = graph.newResource();
- graph.claim(parent, ConsistsOf, PartOf, child);
- Resource nameResource = graph.newResource();
- graph.claim(nameResource, InstanceOf, null, String);
- graph.claimValue(nameResource, name, WriteBindings.STRING);
- graph.claim(child, HasName, NameOf, nameResource);
- return child;
- }
-
- void createChild(WriteOnlyGraph graph, Resource child, Resource parent, String name) throws DatabaseException {
- graph.claim(parent, ConsistsOf, PartOf, child);
- Resource nameResource = graph.newResource();
- graph.claim(nameResource, InstanceOf, null, String);
- graph.claimValue(nameResource, name, WriteBindings.STRING);
- graph.claim(child, HasName, NameOf, nameResource);
- }
-
- int[] getClustering() {
- Variant v = tg.extensions.get(Extensions.CLUSTERING);
- if(v == null) return null;
- try {
- return (int[])v.getValue(Bindings.INT_ARRAY);
- } catch (AdaptException e) {
- Logger.defaultLogError(e);
- return null;
- }
- }
-
- void write(WriteOnlyGraph graph) throws DatabaseException {
-
- Resource[] resources = this.resources;
-
- this.handles = new ResourceHandle[resources.length];
-
- ResourceHandle[] handles = this.handles;
-
- int[] clustering = getClustering();
-
- // Internal identities
- for(Identity identity : tg.identities) {
- IdentityDefinition definition = identity.definition;
- if(resources[identity.resource] != null)
- continue;
- if(definition instanceof External) {
- // Already done everything
- }
- else if(definition instanceof Internal) {
- Internal def = (Internal)definition;
- resources[identity.resource] =
- createChild(graph, resources[def.parent], def.name);
- }
- else if(definition instanceof Root) {
- Root root = (Root)definition;
- resources[identity.resource] = advisor.createRoot(graph, root);
- }
- else if(definition instanceof Optional) {
- Optional def = (Optional)definition;
- Resource child = createChild(graph, resources[def.parent], def.name);
- graph.claim(child, InstanceOf, null, Library); // ???
- resources[identity.resource] = child;
- }
- }
-
- ClusterBuilder builder = graph.getService(ClusterBuilder.class);
- SerialisationSupport ss = graph.getService(SerialisationSupport.class);
-
- if(clustering != null) {
-
- int i = 0;
- for(int c : clustering) {
- builder.newCluster();
- for(int r=0;r<c;r++, i++)
- if(resources[i] == null)
- handles[i] = builder.newResource();
- else
- handles[i] = builder.resource(resources[i]);
-
- }
-
- for(;i<resources.length;++i)
- if(resources[i] == null)
- handles[i] = builder.newResource();
- else
- handles[i] = builder.resource(resources[i]);
-
- } else {
-
- // Create blank resources
- for(int i=0;i<resources.length;++i)
- if(resources[i] == null)
- handles[i] = builder.newResource();
- else
- handles[i] = builder.resource(resources[i]);
-
- }
-
- // Write statements
- int[] statements = tg.statements;
-
- int internals = tg.resourceCount - tg.identities.length;
-
- for(int i=0;i<statements.length;i+=4) {
-
- int sub = statements[i];
- int pred = statements[i+1];
- int inv = statements[i+2];
- int obj = statements[i+3];
-
- ResourceHandle subject = handles[sub];
- ResourceHandle predicate = handles[pred];
- ResourceHandle object = handles[obj];
-
- if(resources[sub] == null) {
- subject.addStatement(graph, predicate, object);
- } else {
- graph.claim(
- handles[sub].resource(ss),
- handles[pred].resource(ss),
- null, handles[obj].resource(ss));
- }
-
- if(inv >= 0) {
-
- if(resources[obj] == null) {
- ResourceHandle inverse = handles[inv];
- object.addStatement(graph, inverse, subject);
- } else {
- graph.claim(
- handles[obj].resource(ss),
- handles[inv].resource(ss),
- null, handles[sub].resource(ss));
- }
-
- }
-
- if(LOG) {
- log("[STATEMENT] " + resources[statements[i]].getResourceId() + ", " + resources[statements[i+1]].getResourceId() + ", " + resources[statements[i+3]].getResourceId());
- }
-
- }
-
- // Write values
- TransferableGraphSupport tgSupport =
- graph.getService(TransferableGraphSupport.class);
- VirtualGraph vg = graph.getProvider();
- for(OldValue1 value : tg.values) {
- int file = value.resource & 0x80000000;
- int resource = value.resource & 0x7FFFFFFF;
- if (file != 0) {
- graph.claimValue(handles[resource].resource(ss), value.value, Bindings.BYTE_ARRAY);
- } else {
- if(resource < internals) {
- handles[resource].addValue(graph, value.value);
- } else {
- tgSupport.setValue(graph, handles[resource].resource(ss), vg, value.value);
- }
- //tgSupport.setValue(resources[resource], vg, value.value);
- }
- }
- }
-
- void write2(WriteOnlyGraph graph) throws DatabaseException {
- Resource[] resources = this.resources;
-
- // Internal identities
- for(Identity identity : tg.identities) {
- IdentityDefinition definition = identity.definition;
- if(resources[identity.resource] != null)
- continue;
- if(definition instanceof External) {
- // Already done everything
- }
- else if(definition instanceof Internal) {
- Internal def = (Internal)definition;
- resources[identity.resource] =
- createChild(graph, resources[def.parent], def.name);
- }
- else if(definition instanceof Root) {
- Root root = (Root)definition;
- resources[identity.resource] = advisor.createRoot(graph, root);
- }
- else if(definition instanceof Optional) {
- Optional def = (Optional)definition;
- Resource child = createChild(graph, resources[def.parent], def.name);
- graph.claim(child, InstanceOf, null, Library); // ???
- resources[identity.resource] = child;
- }
- }
-
- // Create blank resources
- for(int i=0;i<resources.length;++i)
- if(resources[i] == null)
- resources[i] = graph.newResource();
-
- // Write statements
- int[] statements = tg.statements;
-
- for(int i=0;i<statements.length;i+=4) {
- int inv = statements[i+2];
- graph.claim(
- resources[statements[i]],
- resources[statements[i+1]],
- inv < 0 ? null : resources[inv],
- resources[statements[i+3]]
- );
- if(LOG) {
- log("[STATEMENT] " + resources[statements[i]].getResourceId() + ", " + resources[statements[i+1]].getResourceId() + ", " + resources[statements[i+3]].getResourceId());
- }
- }
-
- // Write values
- TransferableGraphSupport tgSupport =
- graph.getService(TransferableGraphSupport.class);
- VirtualGraph vg = graph.getProvider();
- for(OldValue1 value : tg.values) {
- int file = value.resource & 0x80000000;
- int resource = value.resource & 0x7FFFFFFF;
- if (file != 0) {
- graph.claimValue(resources[resource], value.value, Bindings.BYTE_ARRAY);
- } else {
- tgSupport.setValue(graph, resources[resource], vg, value.value);
- }
- }
- }
-
-
- public long[] getResourceIds(SerialisationSupport serializer) throws DatabaseException {
- final int count = resources.length;
- long[] resourceIds = new long[count];
- if(handles != null) {
- for(int i=0;i<count;++i)
- resourceIds[i] = serializer.getRandomAccessId(handles[i].resource(serializer));
- } else {
- for(int i=0;i<count;++i)
- resourceIds[i] = serializer.getRandomAccessId(resources[i]);
- }
- return resourceIds;
- }
-
-}
\ No newline at end of file
+++ /dev/null
-/*******************************************************************************
- * Copyright (c) 2007, 2010 Association for Decentralized Information Management
- * in Industry THTH ry.
- * All rights reserved. This program and the accompanying materials
- * are made available under the terms of the Eclipse Public License v1.0
- * which accompanies this distribution, and is available at
- * http://www.eclipse.org/legal/epl-v10.html
- *
- * Contributors:
- * VTT Technical Research Centre of Finland - initial API and implementation
- *******************************************************************************/
-package org.simantics.graph.db.old;
-
-import java.util.function.BiFunction;
-
-import org.simantics.db.ReadGraph;
-import org.simantics.db.Session;
-import org.simantics.db.WriteGraph;
-import org.simantics.db.WriteOnlyGraph;
-import org.simantics.db.common.request.ReadRequest;
-import org.simantics.db.common.request.WriteOnlyRequest;
-import org.simantics.db.exception.DatabaseException;
-import org.simantics.graph.db.IImportAdvisor;
-import org.simantics.graph.db.ImportAdvisor;
-import org.simantics.graph.db.TransferableGraphException;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
-
-public class OldTransferableGraphs {
-
- public static void importGraph1(Session session, final OldTransferableGraph1 tg, IImportAdvisor advisor, final BiFunction<WriteOnlyGraph, OldTransferableGraphImportProcess1, Boolean> callback) throws DatabaseException, TransferableGraphException {
- final OldTransferableGraphImportProcess1 process = new OldTransferableGraphImportProcess1(tg,
- advisor == null ? new ImportAdvisor() : advisor);
- session.syncRequest(new ReadRequest() {
- @Override
- public void run(ReadGraph graph) throws DatabaseException {
- process.prepare(graph);
- }
- });
- session.syncRequest(new WriteOnlyRequest() {
- @Override
- public void perform(WriteOnlyGraph graph) throws DatabaseException {
- process.write(graph);
- if(callback != null)
- callback.apply(graph, process);
- }
- });
- }
-
- public static void importGraph1(WriteGraph graph, final OldTransferableGraph1 tg, IImportAdvisor advisor) throws DatabaseException {
- final OldTransferableGraphImportProcess1 process = new OldTransferableGraphImportProcess1(tg,
- advisor == null ? new ImportAdvisor() : advisor);
- process.prepare(graph);
- process.write2(graph);
-
- }
-
-}
org.simantics.graph.query,
org.simantics.graph.refactoring,
org.simantics.graph.representation,
- org.simantics.graph.representation.old,
org.simantics.graph.store,
org.simantics.graph.tests.conversion,
org.simantics.graph.utils
import org.simantics.graph.representation.Root;
import org.simantics.graph.representation.TransferableGraph1;
import org.simantics.graph.representation.Value;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
import org.simantics.graph.store.GraphStore;
import org.simantics.graph.store.IStore;
import org.simantics.graph.store.IdentityStore;
return extractIdentities(tg.resourceCount, tg.identities);
}
- public static IdentityStore extractIdentities(OldTransferableGraph1 tg) {
- return extractIdentities(tg.resourceCount, tg.identities);
- }
-
private static IdentityStore extractIdentities(int resourceCount, Identity[] ids) {
IdentityStore identities = new IdentityStore();
identities.setResourceCount(resourceCount);
package org.simantics.graph.refactoring;
-import java.util.ArrayList;
import java.util.Arrays;
import org.simantics.databoard.util.URIStringUtils;
import org.simantics.graph.refactoring.MappingSpecification.MappingRule;
import org.simantics.graph.representation.External;
import org.simantics.graph.representation.Identity;
-import org.simantics.graph.representation.IdentityDefinition;
import org.simantics.graph.representation.Internal;
-import org.simantics.graph.representation.Optional;
import org.simantics.graph.representation.Root;
import org.simantics.graph.representation.TransferableGraph1;
import org.simantics.graph.representation.TransferableGraphUtils;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
-import org.simantics.graph.representation.old.OldValue1;
import org.simantics.graph.store.GraphStore;
import org.simantics.graph.store.IdentityStore;
import org.slf4j.Logger;
}
}
- public static void compactify(OldTransferableGraph1 tg,
- TIntHashSet removed) {
- // Filter removed set
- for(Identity id : tg.identities) {
- IdentityDefinition def = id.definition;
- if(def instanceof Root)
- removed.remove(id.resource);
- else if(def instanceof External)
- removed.remove(((External)def).parent);
- else if(def instanceof Internal)
- removed.remove(((Internal)def).parent);
- else if(def instanceof Optional)
- removed.remove(((Optional)def).parent);
- }
- for(int r : tg.statements)
- removed.remove(r);
- for(OldValue1 value : tg.values)
- removed.remove(value.resource);
-
- // Compactify
- if(!removed.isEmpty()) {
- // create map
- int resourceCount = tg.resourceCount;
- int[] map = new int[resourceCount];
- for(int i=0;i<resourceCount;++i)
- map[i] = i;
- for(int r : removed.toArray()) {
- map[--resourceCount] = map[r];
- }
-
- // map
- ArrayList<Identity> newIdentities = new ArrayList<Identity>(tg.identities.length);
- for(Identity id : tg.identities) {
- if(removed.contains(id.resource))
- continue;
- else
- newIdentities.add(id);
- id.resource = map[id.resource];
- IdentityDefinition def = id.definition;
- if(def instanceof External) {
- External d = (External)def;
- d.parent = map[d.parent];
- }
- else if(def instanceof Internal) {
- External d = (External)def;
- d.parent = map[d.parent];
- }
- else if(def instanceof Optional) {
- External d = (External)def;
- d.parent = map[d.parent];
- }
- }
- tg.identities = newIdentities.toArray(new Identity[newIdentities.size()]);
- int[] statements = tg.statements;
- for(int i=0;i<statements.length;++i) {
- int r = statements[i];
- if(r >= 0)
- statements[i] = map[r];
- }
- for(OldValue1 value : tg.values)
- value.resource = map[value.resource];
- tg.resourceCount = resourceCount;
- }
- }
-
}
+++ /dev/null
-package org.simantics.graph.refactoring;
-
-import gnu.trove.map.hash.THashMap;
-
-import java.io.File;
-import java.io.IOException;
-import java.util.ArrayList;
-import java.util.Collections;
-
-import org.simantics.databoard.Files;
-import org.simantics.graph.query.TransferableGraphConversion;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
-import org.simantics.graph.store.IdentityStore;
-import org.simantics.graph.store.IdentityStore.ConsistsOf;
-
-public class PrintReferencesTool {
-
- public static void main(String[] args) throws Exception {
- print(new File(args[0]));
- }
-
- public static void print(File input) throws IOException {
- OldTransferableGraph1 tg = (OldTransferableGraph1)
- Files.readFile(input, OldTransferableGraph1.BINDING);
- GraphRefactoringUtils.fixIncorrectRoot(tg.identities);
- IdentityStore idStore = TransferableGraphConversion.extractIdentities(tg);
- printExternals(idStore, idStore.getRoot(""), 0);
- }
-
- private static void printExternals(IdentityStore idStore, int cur, int indentation) {
- THashMap<String, ConsistsOf> map = idStore.getChildMap(cur);
- if(map == null)
- return;
- ArrayList<String> names = new ArrayList<String>(map.keySet());
- Collections.sort(names);
- for(String name : names) {
- ConsistsOf co = map.get(name);
- if(!idStore.isNewResource(co.child)) {
- for(int i=0;i<indentation;++i)
- System.out.print(" ");
- System.out.println(name);
- printExternals(idStore, co.child, indentation+1);
- }
- }
- }
-
-}
+++ /dev/null
-package org.simantics.graph.refactoring;
-
-import gnu.trove.set.hash.TIntHashSet;
-
-import java.io.BufferedReader;
-import java.io.File;
-import java.io.FileReader;
-import java.io.IOException;
-import java.util.ArrayList;
-
-import org.simantics.databoard.Files;
-import org.simantics.graph.query.Path;
-import org.simantics.graph.query.TransferableGraphConversion;
-import org.simantics.graph.query.UriUtils;
-import org.simantics.graph.refactoring.MappingSpecification.MappingRule;
-import org.simantics.graph.representation.old.OldTransferableGraph1;
-import org.simantics.graph.store.IdentityStore;
-
-
-public class RefactoringTool {
-
- public static void main(String[] args) throws Exception {
- if(args.length != 3)
- System.out.println("Usage: java " + RefactoringTool.class.getCanonicalName() + " mappingSpec input.tg ouput.tg");
- refactor(new File(args[0]), new File(args[1]), new File(args[2]));
- }
-
- public static void refactor(File mappingSpec, File input, File output) throws IOException, GraphRefactoringException {
- if(!mappingSpec.exists()) {
- System.out.println("Mapping specification " + mappingSpec + " does not exist.");
- return;
- }
- if(!input.exists()) {
- System.out.println("Input tg " + input + " does not exist.");
- return;
- }
-
- MappingSpecification spec = readMappingSpec(mappingSpec);
-
- // Refactor old format
- OldTransferableGraph1 tg = (OldTransferableGraph1)
- Files.readFile(input, OldTransferableGraph1.BINDING);
- boolean fixed = GraphRefactoringUtils.fixIncorrectRoot(tg.identities);
- IdentityStore idStore = TransferableGraphConversion.extractIdentities(tg);
- TIntHashSet parentsAffected = new TIntHashSet();
- GraphRefactoringUtils.refactor(null, idStore, spec, parentsAffected);
- tg.resourceCount = idStore.getResourceCount();
- tg.identities = idStore.toArray();
- GraphRefactoringUtils.compactify(tg, parentsAffected);
- if(fixed)
- GraphRefactoringUtils.unfixIncorrectRoot(tg.identities);
-
- // Write to output file
- Files.writeFile(output, OldTransferableGraph1.BINDING, tg);
- }
-
- private static MappingSpecification readMappingSpec(File mappingSpec) throws IOException {
- BufferedReader reader = new BufferedReader(new FileReader(mappingSpec));
- ArrayList<MappingRule> rules = new ArrayList<MappingRule>();
- while(true) {
- String line = reader.readLine();
- if(line == null)
- break;
- line = line.trim();
- if(line.isEmpty())
- continue;
- String[] parts = line.trim().split(" ");
- if(parts.length != 2)
- throw new IOException("Invalid mapping spec format. Every non-empty line should contain two URIs.");
-
- Path from = UriUtils.uriToPath(parts[0]);
- Path to = UriUtils.uriToPath(parts[1]);
-
- rules.add(new MappingRule(from, to));
- }
- reader.close();
-
- return new MappingSpecification(rules);
- }
-
-}
+++ /dev/null
-/*******************************************************************************
- * Copyright (c) 2007, 2010 Association for Decentralized Information Management
- * in Industry THTH ry.
- * All rights reserved. This program and the accompanying materials
- * are made available under the terms of the Eclipse Public License v1.0
- * which accompanies this distribution, and is available at
- * http://www.eclipse.org/legal/epl-v10.html
- *
- * Contributors:
- * VTT Technical Research Centre of Finland - initial API and implementation
- *******************************************************************************/
-package org.simantics.graph.representation.old;
-
-import java.util.TreeMap;
-
-import org.simantics.databoard.Bindings;
-import org.simantics.databoard.binding.Binding;
-import org.simantics.databoard.binding.mutable.Variant;
-import org.simantics.databoard.serialization.Serializer;
-import org.simantics.graph.representation.External;
-import org.simantics.graph.representation.Identity;
-import org.simantics.graph.representation.Internal;
-import org.simantics.graph.representation.Root;
-import org.simantics.graph.tests.conversion.TransferableGraph0;
-
-
-/**
- * Transferable graph datatype.
- * See <a href="https://www.simantics.org/wiki/index.php/Graph_exchange_format">specification</a>.
- * @author Hannu Niemist�
- *
- * @deprecated superceded by {@link TransferableGraph0}
- */
-@Deprecated
-public class OldTransferableGraph1 {
- public static Binding BINDING = Bindings.getBindingUnchecked(OldTransferableGraph1.class);
- public static Serializer SERIALIZER = Bindings.getSerializerUnchecked(BINDING);
-
- public int resourceCount;
- public Identity[] identities;
- public int[] statements;
- public OldValue1[] values;
- public TreeMap<String, Variant> extensions;
-
- public OldTransferableGraph1() {}
-
- public OldTransferableGraph1(int resourceCount, Identity[] identities,
- int[] statements, OldValue1[] values) {
- this(resourceCount, identities, statements, values,
- new TreeMap<String, Variant>());
- }
-
- public OldTransferableGraph1(int resourceCount, Identity[] identities,
- int[] statements, OldValue1[] values, TreeMap<String, Variant> extensions) {
- this.resourceCount = resourceCount;
- this.identities = identities;
- this.statements = statements;
- this.values = values;
- this.extensions = extensions;
- }
-
- public void print() {
- System.out.println("Identities");
- for(Identity id : identities) {
- System.out.print(" " + id.resource + " = ");
- if(id.definition instanceof Root) {
- Root def = (Root)id.definition;
- System.out.println("ROOT(" + def.name + ")");
- }
- else if(id.definition instanceof External) {
- External def = (External)id.definition;
- System.out.println("EXTERNAL(" + def.parent + ", " + def.name + ")");
- }
- else if(id.definition instanceof Internal) {
- Internal def = (Internal)id.definition;
- System.out.println("INTERNAL(" + def.parent + ", " + def.name + ")");
- }
- }
- System.out.println("Statements:");
- for(int i=0;i<statements.length;i+=4)
- System.out.println(" " +
- statements[i] + " " +
- statements[i+1] + " " +
- statements[i+2] + " " +
- statements[i+3]
- );
- }
-}
+++ /dev/null
-/*******************************************************************************
- * Copyright (c) 2007, 2010 Association for Decentralized Information Management
- * in Industry THTH ry.
- * All rights reserved. This program and the accompanying materials
- * are made available under the terms of the Eclipse Public License v1.0
- * which accompanies this distribution, and is available at
- * http://www.eclipse.org/legal/epl-v10.html
- *
- * Contributors:
- * VTT Technical Research Centre of Finland - initial API and implementation
- *******************************************************************************/
-package org.simantics.graph.representation.old;
-
-
-/**
- * A part of TransferableGraph data structure.
- * Says that the resource has a literal with given value.
- * @author Hannu Niemist�
- */
-public class OldValue1 {
- public int resource;
- public byte[] value;
-
- public OldValue1() {
- }
-
- public OldValue1(int resource, byte[] value) {
- this.resource = resource;
- this.value = value;
- }
-}
+++ /dev/null
-package org.simantics.graph.tests.refactoring;
-
-import java.io.File;
-import java.net.URLDecoder;
-
-import org.simantics.graph.refactoring.PrintReferencesTool;
-import org.simantics.graph.refactoring.RefactoringTool;
-
-public class TestRefactoring {
-
- public static void main(String[] args) throws Exception {
- File dir = new File(URLDecoder.decode(TestRefactoring.class.getResource(".").getPath(), "UTF-8")).getAbsoluteFile();// new File(TestRefactoring.class.getResource(".").getFile());
- System.out.println(dir);
- File input = new File(dir, "xor5.aprosSymbol");
- File mappingSpec = new File(dir, "mappingSpec.txt");
- File output = new File(dir, "xor5_refactored.aprosSymbol");
-
- System.out.println("-- Before refactoring");
- System.out.println("------------------------------------------");
- PrintReferencesTool.print(input);
-
- RefactoringTool.refactor(mappingSpec, input, output);
-
- System.out.println("-- After refactoring");
- System.out.println("------------------------------------------");
- PrintReferencesTool.print(output);
- }
-
-}
+++ /dev/null
-package org.simantics.graph.tests.refactoring;
-
-import java.io.File;
-import java.net.URLDecoder;
-import java.util.ArrayList;
-import java.util.List;
-
-import org.simantics.graph.refactoring.RefactoringTool;
-
-public class TestRefactoring2 {
-
- public static void main(String[] args) throws Exception {
- File dir = new File(URLDecoder.decode(TestRefactoring2.class.getResource(".").getPath(), "UTF-8")).getAbsoluteFile();// new File(TestRefactoring.class.getResource(".").getFile());
- System.out.println(dir);
- File allFiles[] = dir.listFiles();
- List<File> inputFiles = new ArrayList<File>();
- List<File> outputFiles = new ArrayList<File>();
- String ext = ".aprosSymbol";
- File outDir = new File(dir,"out");
- if (!outDir.exists())
- outDir.mkdir();
- for (File f: allFiles) {
- if (!f.isFile())
- continue;
- if (!f.getName().endsWith(ext))
- continue;
- inputFiles.add(f);
- String outputName = f.getName();
- outputFiles.add(new File(outDir,outputName));
- }
-
- File mappingSpec = new File(dir, "mappingSpec.txt");
- for (int i = 0; i < inputFiles.size() ; i++) {
-
- File input = inputFiles.get(i);
- File output = outputFiles.get(i);
-
- System.out.println(input + " -> " + output);
-
- RefactoringTool.refactor(mappingSpec, input, output);
- }
- }
-
-}
+++ /dev/null
-http://www.apros.fi/AprosStatic-6.0 http://www.apros.fi/Combustion/Configuration-6.0
-http://www.apros.fi/AprosDiagram-6.0/Terminals http://www.apros.fi/Apros-6.1/Terminals
-http://www.apros.fi/AprosDiagram-6.0/Relations http://www.apros.fi/Combustion/Diagram-6.0/Relations
-http://www.apros.fi/AprosDiagram-6.0/Symbols http://www.apros.fi/Combustion/Diagram-6.0/Symbols
-http://www.apros.fi/AprosDiagram-6.0/AnalogSignalOutputRelation http://www.apros.fi/Combustion/Diagram-6.0/AnalogSignalOutputRelation
-http://www.apros.fi/AprosDiagram-6.0/BinarySignalOutputRelation http://www.apros.fi/Combustion/Diagram-6.0/BinarySignalOutputRelation
\ No newline at end of file
Code Review / simantics / platform.git / commitdiff