<!-- class="org.simantics.modeling.ui.actions.MigrateMasterTypical" /> -->
<resource
uri="http://www.simantics.org/Modeling-0.0/ModelingActionContext/Actions/CompilePGraphs"
- class="org.simantics.modeling.ui.actions.CompilePGraphs" />
+ class="org.simantics.modeling.ui.actions.CompilePGraphsAction" />
<resource
uri="http://www.simantics.org/Modeling-0.0/ModelingActionContext/Actions/Delete"
class="org.simantics.modeling.ui.actions.Delete" />
+++ /dev/null
-package org.simantics.modeling.ui.actions;
-
-import static org.simantics.db.common.utils.Transaction.endTransaction;
-
-import java.io.ByteArrayInputStream;
-import java.io.Closeable;
-import java.io.File;
-import java.io.FileNotFoundException;
-import java.io.FileOutputStream;
-import java.io.IOException;
-import java.io.InputStream;
-import java.io.UnsupportedEncodingException;
-import java.net.URL;
-import java.net.URLDecoder;
-import java.util.ArrayList;
-import java.util.Collection;
-import java.util.Collections;
-import java.util.HashMap;
-import java.util.Map;
-import java.util.Set;
-
-import org.eclipse.core.runtime.FileLocator;
-import org.eclipse.jface.dialogs.MessageDialog;
-import org.eclipse.jface.layout.GridDataFactory;
-import org.eclipse.jface.layout.GridLayoutFactory;
-import org.eclipse.swt.SWT;
-import org.eclipse.swt.widgets.Composite;
-import org.eclipse.swt.widgets.Control;
-import org.eclipse.swt.widgets.Display;
-import org.eclipse.swt.widgets.Shell;
-import org.osgi.framework.Bundle;
-import org.simantics.PlatformException;
-import org.simantics.Simantics;
-import org.simantics.databoard.Bindings;
-import org.simantics.db.ReadGraph;
-import org.simantics.db.Resource;
-import org.simantics.db.WriteGraph;
-import org.simantics.db.common.request.IndexRoot;
-import org.simantics.db.common.request.ObjectsWithType;
-import org.simantics.db.common.request.ReadRequest;
-import org.simantics.db.common.request.UniqueRead;
-import org.simantics.db.common.request.WriteRequest;
-import org.simantics.db.common.utils.Logger;
-import org.simantics.db.exception.DatabaseException;
-import org.simantics.db.layer0.adapter.ActionFactory;
-import org.simantics.db.layer0.adapter.CopyHandler;
-import org.simantics.db.layer0.adapter.SubgraphExtent.ExtentStatus;
-import org.simantics.db.layer0.adapter.impl.DefaultCopyHandler;
-import org.simantics.db.layer0.adapter.impl.DefaultPasteHandler;
-import org.simantics.db.layer0.adapter.impl.DefaultPasteImportAdvisor;
-import org.simantics.db.layer0.util.ClipboardUtils;
-import org.simantics.db.layer0.util.DomainProcessorState;
-import org.simantics.db.layer0.util.Layer0Utils;
-import org.simantics.db.layer0.util.ModelTransferableGraphSource;
-import org.simantics.db.layer0.util.ModelTransferableGraphSourceRequest;
-import org.simantics.db.layer0.util.SimanticsClipboard.Representation;
-import org.simantics.db.layer0.util.SimanticsClipboardImpl;
-import org.simantics.db.layer0.util.SimanticsKeys;
-import org.simantics.db.layer0.util.TransferableGraphConfiguration2;
-import org.simantics.db.service.SerialisationSupport;
-import org.simantics.graph.compiler.CompilationResult;
-import org.simantics.graph.compiler.ExternalFileLoader;
-import org.simantics.graph.compiler.GraphCompiler;
-import org.simantics.graph.compiler.GraphCompilerPreferences;
-import org.simantics.graph.compiler.ValidationMode;
-import org.simantics.graph.db.TransferableGraphSource;
-import org.simantics.graph.db.TransferableGraphs;
-import org.simantics.graph.diff.Diff;
-import org.simantics.graph.diff.TransferableGraphDelta1;
-import org.simantics.graph.representation.Identity;
-import org.simantics.graph.representation.Root;
-import org.simantics.graph.representation.TransferableGraph1;
-import org.simantics.graphfile.ontology.GraphFileResource;
-import org.simantics.layer0.Layer0;
-import org.simantics.ltk.ISource;
-import org.simantics.ltk.Problem;
-import org.simantics.modeling.ui.Activator;
-import org.simantics.utils.datastructures.Pair;
-
-/**
- * @author Antti Villberg
- */
-public class CompilePGraphs implements ActionFactory {
-
- @Override
- public Runnable create(Object target) {
-
- if (!(target instanceof Resource))
- return null;
-
- final Resource r = (Resource)target;
-
- return new Runnable() {
-
- private void uncheckedClose(Closeable closeable) {
- try {
- if (closeable != null)
- closeable.close();
- } catch (IOException e) {
- //ignore
- }
- }
-
- private File copyResource(URL url, File targetFile) throws IOException, FileNotFoundException {
- FileOutputStream os = null;
- InputStream is = null;
- try {
- if (targetFile.exists())
- targetFile.delete();
-
- is = url.openStream();
- int read;
- byte [] buffer = new byte [16384];
- os = new FileOutputStream (targetFile);
- while ((read = is.read (buffer)) != -1) {
- os.write(buffer, 0, read);
- }
- os.close ();
- is.close ();
-
- return targetFile;
- } finally {
- uncheckedClose(os);
- uncheckedClose(is);
- }
- }
-
- private File extractLib(URL libURL, String libName) throws FileNotFoundException, IOException {
- String tmpDirStr = System.getProperty("java.io.tmpdir");
- if (tmpDirStr == null)
- throw new NullPointerException("java.io.tmpdir property is null");
- File tmpDir = new File(tmpDirStr);
- File libFile = new File(tmpDir, libName);
- return copyResource(libURL, libFile);
- }
-
- private File url2file(URL url, String fileName) {
- if ("file".equals(url.getProtocol())) {
- try {
- File path = new File(URLDecoder.decode(url.getPath(), "UTF-8"));
- return path;
- } catch (UnsupportedEncodingException e) {
- Logger.defaultLogError(e);
- }
- } else if ("jar".equals(url.getProtocol())) {
- try {
- File libFile = extractLib(url, fileName);
- return libFile;
- } catch (FileNotFoundException e) {
- Logger.defaultLogError(e);
- } catch (IOException e) {
- Logger.defaultLogError(e);
- }
- } else {
- System.err.println("Unsupported URL protocol '" + url + "' for FastLZ native library file '" + fileName);
- }
- return null;
- }
- @Override
- public void run() {
-
- try {
-
- final Collection<ISource> sources = new ArrayList<ISource>();
- Collection<TransferableGraph1> dependencies = new ArrayList<TransferableGraph1>();
-
- for(Bundle b : Activator.getContext().getBundles()) {
- URL tg = b.getEntry("/graph.tg");
- if(tg == null) continue;
- File f = url2file(FileLocator.resolve(tg), b.getSymbolicName());
- dependencies.add(GraphCompiler.read(f));
- }
-
- final TransferableGraph1 thisOntology = Simantics.sync(new UniqueRead<TransferableGraph1>() {
-
- @Override
- public TransferableGraph1 perform(ReadGraph graph) throws DatabaseException {
-
- Layer0 L0 = Layer0.getInstance(graph);
- Resource parent = graph.getSingleObject(r, L0.PartOf);
-
- CopyHandler ch = new DefaultCopyHandler(r) {
-
- protected TransferableGraphConfiguration2 createConfiguration(ReadGraph graph, boolean cut) throws DatabaseException {
-
- Map<Resource, ExtentStatus> preStatus = new HashMap<Resource, ExtentStatus>();
- preStatus.put(r, ExtentStatus.EXTERNAL);
- if(!parent.equals(graph.getRootLibrary()))
- preStatus.put(parent, ExtentStatus.EXTERNAL);
-
- return new TransferableGraphConfiguration2(null, Collections.emptyList(), preStatus, true, true);
-
- }
-
- protected TransferableGraphSource computeSource(ReadGraph graph, TransferableGraphConfiguration2 conf) throws DatabaseException {
- return graph.syncRequest(new ModelTransferableGraphSourceRequest(conf) {
-
- protected ModelTransferableGraphSource getSource(ReadGraph graph, TransferableGraphConfiguration2 configuration, DomainProcessorState state, File otherStatementsFile, File valueFile) throws DatabaseException {
- return new ModelTransferableGraphSource(graph, configuration, state, otherStatementsFile, valueFile) {
-
- @Override
- protected Identity getRootIdentity(DomainProcessorState state, SerialisationSupport support, Resource rootLibrary) throws DatabaseException {
- return new Identity(state.ids.get(support.getTransientId(rootLibrary)), new Root("", ""));
- }
-
- };
- }
-
- });
- }
-
- };
- SimanticsClipboardImpl clipboard = new SimanticsClipboardImpl();
- ch.copyToClipboard(graph, clipboard);
- for (Set<Representation> object : clipboard.getContents()) {
- TransferableGraph1 tg = ClipboardUtils.accept(graph, object, SimanticsKeys.KEY_TRANSFERABLE_GRAPH);
- if(tg != null) return tg;
- }
- return null;
- }
-
- });
-
- dependencies.add(thisOntology);
-
- Simantics.sync(new ReadRequest() {
-
- @Override
- public void run(ReadGraph graph) throws DatabaseException {
- Layer0 L0 = Layer0.getInstance(graph);
- for(Resource file : graph.syncRequest(new ObjectsWithType(r, L0.ConsistsOf, L0.PGraph))) {
-
- final String src = graph.getRelatedValue(file, L0.PGraph_definition, Bindings.STRING);
-
- final ByteArrayInputStream baos = new ByteArrayInputStream(src.getBytes());
-
- sources.add(new ISource() {
-
- @Override
- public int startPos() {
- return 0;
- }
-
- @Override
- public int startLine() {
- return 0;
- }
-
- @Override
- public InputStream open() throws IOException {
- return baos;
- }
-
- @Override
- public int length() throws IOException {
- return src.length();
- }
-
- @Override
- public String getName() {
- return "Source";
- }
-
- });
-
- }
- }
-
- });
-
- final StringBuilder errorStringBuilder = new StringBuilder();
- GraphCompilerPreferences prefs = new GraphCompilerPreferences();
- prefs.validate = true;
- prefs.validateRelationRestrictions = ValidationMode.ERROR;
- prefs.validateResourceHasType = ValidationMode.IGNORE;
-
- final CompilationResult result = Simantics.sync(new UniqueRead<CompilationResult>() {
-
- @Override
- public CompilationResult perform(ReadGraph graph) throws DatabaseException {
-
- final Resource root = graph.syncRequest(new IndexRoot(r));
- final String baseURI = graph.getURI(root);
-
- ExternalFileLoader fileLoader = new ExternalFileLoader() {
- @Override
- public byte[] load(String fileName) throws IOException {
- try {
- GraphFileResource GF = GraphFileResource.getInstance(graph);
- Resource file = graph.getResource(baseURI + "/" + fileName);
- return graph.getRelatedValue(file, GF.HasFiledata, Bindings.BYTE_ARRAY);
- } catch (DatabaseException e) {
- throw new IOException(e);
- }
- }
- };
-
- return GraphCompiler.compile("1.1", sources, dependencies, fileLoader, prefs);
-
- }
-
- });
-
- for(Problem problem : result.getErrors())
- errorStringBuilder.append(problem.getLocation() + ": " + problem.getDescription() + "\n");
- for(Problem problem : result.getWarnings())
- errorStringBuilder.append(problem.getLocation() + ": " + problem.getDescription() + "\n");
-
- if(!result.getErrors().isEmpty() || !result.getWarnings().isEmpty()) {
-
- class ErrorMessageDialog extends MessageDialog {
-
- public ErrorMessageDialog(Shell shell) {
- super(shell,
- "Unsatisfied dependencies", null,
- "The following dependencies were missing. Please import the dependencies and try again.",
- MessageDialog.ERROR, new String[] { "Continue" }, 0);
- }
-
- @Override
- protected Control createCustomArea(Composite composite) {
-
- GridLayoutFactory.fillDefaults().applyTo(composite);
-
- org.eclipse.swt.widgets.List list = new org.eclipse.swt.widgets.List(composite, SWT.BORDER | SWT.READ_ONLY);
- GridDataFactory.fillDefaults().grab(true, true).applyTo(list);
- for(Problem problem : result.getErrors())
- list.add(problem.getLocation() + ": " + problem.getDescription() + "\n");
- for(Problem problem : result.getWarnings())
- list.add(problem.getLocation() + ": " + problem.getDescription() + "\n");
-
- return composite;
-
- }
-
- }
-
- ErrorMessageDialog md = new ErrorMessageDialog(Display.getCurrent().getActiveShell());
- md.open();
-
- return;
- }
-
-
- final Pair<TransferableGraph1, long[]> existing = Simantics.sync(new UniqueRead<Pair<TransferableGraph1, long[]>>() {
-
- @Override
- public Pair<TransferableGraph1, long[]> perform(ReadGraph graph) throws DatabaseException {
- Layer0 L0 = Layer0.getInstance(graph);
- TransferableGraph1 tg = graph.getPossibleRelatedValue(r, L0.SharedOntology_tg, Bindings.getBindingUnchecked( TransferableGraph1.class ));
- if(tg == null) return null;
- long[] tgResources = graph.getPossibleRelatedValue(r, L0.SharedOntology_tgResources, Bindings.LONG_ARRAY);
- if(tgResources == null) return null;
- return Pair.make(tg, tgResources);
- }
-
- });
-
- if(existing != null) {
-
- try {
-
- Simantics.sync(new WriteRequest() {
-
- @Override
- public void perform(WriteGraph graph) throws DatabaseException {
-
- TransferableGraphDelta1 delta = new Diff(existing.first, result.getGraph()).diff();
- long[] resourceArray = TransferableGraphs.applyDelta(graph, existing.second, delta);
-
- Layer0 L0 = Layer0.getInstance(graph);
- graph.claimLiteral(r, L0.SharedOntology_tg, result.getGraph(), Bindings.getBindingUnchecked( TransferableGraph1.class ));
- graph.claimLiteral(r, L0.SharedOntology_tgResources, L0.ResourceIdArray, resourceArray, Bindings.LONG_ARRAY);
-
- Layer0Utils.addCommentMetadata(graph, "Compiled ontology " + graph.getURI(r));
-
- }
-
- });
-
- } catch (Throwable t) {
- throw new PlatformException(t);
- } finally {
- endTransaction();
- }
-
- } else {
-
- final DefaultPasteImportAdvisor advisor = new DefaultPasteImportAdvisor(r);
-
- DefaultPasteHandler.defaultExecute(result.getGraph(), r, advisor);
-
- Simantics.sync(new WriteRequest() {
-
- @Override
- public void perform(WriteGraph graph) throws DatabaseException {
-
- Layer0 L0 = Layer0.getInstance(graph);
- graph.claimLiteral(r, L0.SharedOntology_tg, result.getGraph(), Bindings.getBindingUnchecked( TransferableGraph1.class ));
- graph.claimLiteral(r, L0.SharedOntology_tgResources, L0.ResourceIdArray, advisor.getResourceIds(), Bindings.LONG_ARRAY);
-
- Layer0Utils.addCommentMetadata(graph, "Compiled ontology " + graph.getURI(r));
-
- }
-
- });
-
- }
-
- } catch (Exception e) {
- Logger.defaultLogError(e);
- }
-
- }
-
- };
-
- }
-
-}
--- /dev/null
+package org.simantics.modeling.ui.actions;
+
+import java.io.IOException;
+
+import org.eclipse.jface.dialogs.MessageDialog;
+import org.eclipse.jface.layout.GridDataFactory;
+import org.eclipse.jface.layout.GridLayoutFactory;
+import org.eclipse.swt.SWT;
+import org.eclipse.swt.widgets.Composite;
+import org.eclipse.swt.widgets.Control;
+import org.eclipse.swt.widgets.Display;
+import org.eclipse.swt.widgets.Shell;
+import org.simantics.db.Resource;
+import org.simantics.db.exception.DatabaseException;
+import org.simantics.db.layer0.adapter.ActionFactory;
+import org.simantics.graph.compiler.CompilationResult;
+import org.simantics.ltk.Problem;
+import org.simantics.modeling.CompilePGraphs;
+import org.simantics.utils.ui.ExceptionUtils;
+
+/**
+ * @author Antti Villberg
+ */
+public class CompilePGraphsAction implements ActionFactory {
+
+ @Override
+ public Runnable create(Object target) {
+ if (!(target instanceof Resource))
+ return null;
+ return () -> {
+ try {
+ CompilePGraphs.compilePGraphs((Resource) target, new CompileUserAgent());
+ } catch (IOException | DatabaseException e) {
+ ExceptionUtils.logAndShowError(e);
+ }
+ };
+ }
+
+ public static class CompileUserAgent implements CompilePGraphs.UserAgent {
+ @Override
+ public void reportProblems(CompilationResult result) {
+ class ErrorMessageDialog extends MessageDialog {
+ public ErrorMessageDialog(Shell shell) {
+ super(shell,
+ "Unsatisfied dependencies", null,
+ "The following dependencies were missing. Please import the dependencies and try again.",
+ MessageDialog.ERROR, new String[] { "Continue" }, 0);
+ }
+
+ @Override
+ protected Control createCustomArea(Composite composite) {
+ GridLayoutFactory.fillDefaults().applyTo(composite);
+
+ org.eclipse.swt.widgets.List list = new org.eclipse.swt.widgets.List(composite, SWT.BORDER | SWT.READ_ONLY);
+ GridDataFactory.fillDefaults().grab(true, true).applyTo(list);
+ for (Problem problem : result.getErrors())
+ list.add(problem.getLocation() + ": " + problem.getDescription() + "\n");
+ for (Problem problem : result.getWarnings())
+ list.add(problem.getLocation() + ": " + problem.getDescription() + "\n");
+
+ return composite;
+ }
+ }
+
+ ErrorMessageDialog md = new ErrorMessageDialog(Display.getCurrent().getActiveShell());
+ md.open();
+ }
+ }
+
+}
org.simantics.selectionview.ontology;bundle-version="1.2.0",
org.simantics.scl.ui;bundle-version="0.5.0",
org.slf4j.api,
- org.apache.batik
+ org.simantics.graphfile.ontology,
+ org.apache.batik,
+ org.simantics.ltk,
+ org.simantics.graph.compiler
Export-Package: org.simantics.modeling,
org.simantics.modeling.actions,
org.simantics.modeling.adapters,
--- /dev/null
+import "Simantics/DB"
+
+importJava "org.simantics.modeling.CompilePGraphs" where
+ compilePGraphs :: Resource -> <Proc> ()
\ No newline at end of file
--- /dev/null
+package org.simantics.modeling;
+
+import java.io.ByteArrayInputStream;
+import java.io.File;
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.UnsupportedEncodingException;
+import java.net.URL;
+import java.net.URLDecoder;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.Map;
+import java.util.Set;
+
+import org.eclipse.core.runtime.FileLocator;
+import org.osgi.framework.Bundle;
+import org.simantics.Simantics;
+import org.simantics.databoard.Bindings;
+import org.simantics.db.ReadGraph;
+import org.simantics.db.Resource;
+import org.simantics.db.WriteGraph;
+import org.simantics.db.common.request.IndexRoot;
+import org.simantics.db.common.request.ObjectsWithType;
+import org.simantics.db.common.request.ReadRequest;
+import org.simantics.db.common.request.UniqueRead;
+import org.simantics.db.common.request.WriteRequest;
+import org.simantics.db.common.utils.Logger;
+import org.simantics.db.exception.DatabaseException;
+import org.simantics.db.layer0.adapter.CopyHandler;
+import org.simantics.db.layer0.adapter.SubgraphExtent.ExtentStatus;
+import org.simantics.db.layer0.adapter.impl.DefaultCopyHandler;
+import org.simantics.db.layer0.adapter.impl.DefaultPasteHandler;
+import org.simantics.db.layer0.adapter.impl.DefaultPasteImportAdvisor;
+import org.simantics.db.layer0.util.ClipboardUtils;
+import org.simantics.db.layer0.util.DomainProcessorState;
+import org.simantics.db.layer0.util.Layer0Utils;
+import org.simantics.db.layer0.util.ModelTransferableGraphSource;
+import org.simantics.db.layer0.util.ModelTransferableGraphSourceRequest;
+import org.simantics.db.layer0.util.SimanticsClipboard.Representation;
+import org.simantics.db.layer0.util.SimanticsClipboardImpl;
+import org.simantics.db.layer0.util.SimanticsKeys;
+import org.simantics.db.layer0.util.TransferableGraphConfiguration2;
+import org.simantics.db.service.SerialisationSupport;
+import org.simantics.graph.compiler.CompilationResult;
+import org.simantics.graph.compiler.ExternalFileLoader;
+import org.simantics.graph.compiler.GraphCompiler;
+import org.simantics.graph.compiler.GraphCompilerPreferences;
+import org.simantics.graph.compiler.ValidationMode;
+import org.simantics.graph.db.TransferableGraphException;
+import org.simantics.graph.db.TransferableGraphSource;
+import org.simantics.graph.db.TransferableGraphs;
+import org.simantics.graph.diff.Diff;
+import org.simantics.graph.diff.TransferableGraphDelta1;
+import org.simantics.graph.representation.Identity;
+import org.simantics.graph.representation.Root;
+import org.simantics.graph.representation.TransferableGraph1;
+import org.simantics.graphfile.ontology.GraphFileResource;
+import org.simantics.layer0.Layer0;
+import org.simantics.ltk.ISource;
+import org.simantics.ltk.Problem;
+import org.simantics.modeling.internal.Activator;
+import org.simantics.utils.FileUtils;
+import org.simantics.utils.datastructures.Pair;
+
+/**
+ * @author Antti Villberg
+ */
+public class CompilePGraphs {
+
+ public static interface UserAgent {
+ void reportProblems(CompilationResult result);
+ }
+
+ /**
+ * <code>Simantics/PGraph#compilePGraphs</code> SCL API.
+ *
+ * @param r
+ * @throws IOException
+ * @throws DatabaseException
+ */
+ public static void compilePGraphs(Resource r) throws IOException, DatabaseException {
+ compilePGraphs(r, null);
+ }
+
+ public static void compilePGraphs(Resource r, UserAgent userAgent) throws IOException, DatabaseException {
+ final Collection<ISource> sources = new ArrayList<>();
+ Collection<TransferableGraph1> dependencies = new ArrayList<>();
+
+ for (Bundle b : Activator.getContext().getBundles()) {
+ URL tg = b.getEntry("/graph.tg");
+ if (tg == null) continue;
+ File f = url2file(FileLocator.resolve(tg), b.getSymbolicName());
+ try {
+ dependencies.add(GraphCompiler.read(f));
+ } catch (Exception e) {
+ throw new IOException("Failed to read compiled transferable graph as dependency: " + f, e);
+ }
+ }
+
+ final TransferableGraph1 thisOntology = Simantics.sync(new UniqueRead<TransferableGraph1>() {
+
+ @Override
+ public TransferableGraph1 perform(ReadGraph graph) throws DatabaseException {
+ Layer0 L0 = Layer0.getInstance(graph);
+ Resource parent = graph.getSingleObject(r, L0.PartOf);
+
+ CopyHandler ch = new DefaultCopyHandler(r) {
+ protected TransferableGraphConfiguration2 createConfiguration(ReadGraph graph, boolean cut) throws DatabaseException {
+ Map<Resource, ExtentStatus> preStatus = new HashMap<>();
+ preStatus.put(r, ExtentStatus.EXTERNAL);
+ if (!parent.equals(graph.getRootLibrary()))
+ preStatus.put(parent, ExtentStatus.EXTERNAL);
+ return new TransferableGraphConfiguration2(null, Collections.emptyList(), preStatus, true, true);
+ }
+
+ protected TransferableGraphSource computeSource(ReadGraph graph, TransferableGraphConfiguration2 conf) throws DatabaseException {
+ return graph.syncRequest(new ModelTransferableGraphSourceRequest(conf) {
+ protected ModelTransferableGraphSource getSource(ReadGraph graph, TransferableGraphConfiguration2 configuration, DomainProcessorState state, File otherStatementsFile, File valueFile) throws DatabaseException {
+ return new ModelTransferableGraphSource(graph, configuration, state, otherStatementsFile, valueFile) {
+ @Override
+ protected Identity getRootIdentity(DomainProcessorState state, SerialisationSupport support, Resource rootLibrary) throws DatabaseException {
+ return new Identity(state.ids.get(support.getTransientId(rootLibrary)), new Root("", ""));
+ }
+ };
+ }
+ });
+ }
+ };
+
+ SimanticsClipboardImpl clipboard = new SimanticsClipboardImpl();
+ ch.copyToClipboard(graph, clipboard);
+ for (Set<Representation> object : clipboard.getContents()) {
+ TransferableGraph1 tg = ClipboardUtils.accept(graph, object, SimanticsKeys.KEY_TRANSFERABLE_GRAPH);
+ if (tg != null)
+ return tg;
+ }
+
+ return null;
+ }
+ });
+
+ if (thisOntology == null)
+ throw new DatabaseException("Failed to dump the containing ontology of " + r + " into TransferableGraph1");
+
+ dependencies.add(thisOntology);
+
+ Simantics.sync(new ReadRequest() {
+ @Override
+ public void run(ReadGraph graph) throws DatabaseException {
+ Layer0 L0 = Layer0.getInstance(graph);
+ for (Resource file : graph.syncRequest(new ObjectsWithType(r, L0.ConsistsOf, L0.PGraph))) {
+ String src = graph.getRelatedValue(file, L0.PGraph_definition, Bindings.STRING);
+ sources.add(new StringSource(src));
+ }
+ }
+ });
+
+ GraphCompilerPreferences prefs = new GraphCompilerPreferences();
+ prefs.validate = true;
+ prefs.validateRelationRestrictions = ValidationMode.ERROR;
+ prefs.validateResourceHasType = ValidationMode.IGNORE;
+ final CompilationResult result = Simantics.sync(new UniqueRead<CompilationResult>() {
+ @Override
+ public CompilationResult perform(ReadGraph graph) throws DatabaseException {
+ final Resource root = graph.syncRequest(new IndexRoot(r));
+ final String baseURI = graph.getURI(root);
+
+ GraphFileResource GF = GraphFileResource.getInstance(graph);
+ ExternalFileLoader fileLoader = fileName -> {
+ try {
+ Resource file = graph.getResource(baseURI + "/" + fileName);
+ return graph.getRelatedValue(file, GF.HasFiledata, Bindings.BYTE_ARRAY);
+ } catch (DatabaseException e) {
+ throw new IOException(e);
+ }
+ };
+
+ return GraphCompiler.compile("1.1", sources, dependencies, fileLoader, prefs);
+ }
+ });
+
+ if (!result.getErrors().isEmpty() || !result.getWarnings().isEmpty()) {
+ if (userAgent != null) {
+ userAgent.reportProblems(result);
+ return;
+ } else {
+ StringBuilder error = new StringBuilder();
+ for (Problem problem : result.getErrors())
+ error.append(problem.getLocation() + ": " + problem.getDescription() + "\n");
+ for (Problem problem : result.getWarnings())
+ error.append(problem.getLocation() + ": " + problem.getDescription() + "\n");
+ throw new DatabaseException(error.toString());
+ }
+ }
+
+ final Pair<TransferableGraph1, long[]> existing = Simantics.sync(new UniqueRead<Pair<TransferableGraph1, long[]>>() {
+ @Override
+ public Pair<TransferableGraph1, long[]> perform(ReadGraph graph) throws DatabaseException {
+ Layer0 L0 = Layer0.getInstance(graph);
+ TransferableGraph1 tg = graph.getPossibleRelatedValue(r, L0.SharedOntology_tg, Bindings.getBindingUnchecked( TransferableGraph1.class ));
+ if(tg == null) return null;
+ long[] tgResources = graph.getPossibleRelatedValue(r, L0.SharedOntology_tgResources, Bindings.LONG_ARRAY);
+ if(tgResources == null) return null;
+ return Pair.make(tg, tgResources);
+ }
+ });
+
+ if (existing != null) {
+ Simantics.sync(new WriteRequest() {
+ @Override
+ public void perform(WriteGraph graph) throws DatabaseException {
+ TransferableGraphDelta1 delta = new Diff(existing.first, result.getGraph()).diff();
+ long[] resourceArray = TransferableGraphs.applyDelta(graph, existing.second, delta);
+
+ Layer0 L0 = Layer0.getInstance(graph);
+ graph.claimLiteral(r, L0.SharedOntology_tg, result.getGraph(), Bindings.getBindingUnchecked( TransferableGraph1.class ));
+ graph.claimLiteral(r, L0.SharedOntology_tgResources, L0.ResourceIdArray, resourceArray, Bindings.LONG_ARRAY);
+
+ Layer0Utils.addCommentMetadata(graph, "Compiled ontology " + graph.getURI(r));
+ }
+ });
+ } else {
+ final DefaultPasteImportAdvisor advisor = new DefaultPasteImportAdvisor(r);
+ try {
+ DefaultPasteHandler.defaultExecute(result.getGraph(), r, advisor);
+ } catch (TransferableGraphException e) {
+ // TODO: defaultExecute never actually throws this exception!
+ throw new DatabaseException(e);
+ }
+
+ Simantics.sync(new WriteRequest() {
+ @Override
+ public void perform(WriteGraph graph) throws DatabaseException {
+ Layer0 L0 = Layer0.getInstance(graph);
+ graph.claimLiteral(r, L0.SharedOntology_tg, result.getGraph(), Bindings.getBindingUnchecked( TransferableGraph1.class ));
+ graph.claimLiteral(r, L0.SharedOntology_tgResources, L0.ResourceIdArray, advisor.getResourceIds(), Bindings.LONG_ARRAY);
+
+ Layer0Utils.addCommentMetadata(graph, "Compiled ontology " + graph.getURI(r));
+ }
+ });
+ }
+ }
+
+ private static File extractLib(URL libURL, String libName) throws FileNotFoundException, IOException {
+ String tmpDirStr = System.getProperty("java.io.tmpdir");
+ if (tmpDirStr == null)
+ throw new NullPointerException("java.io.tmpdir property is null");
+ File tmpDir = new File(tmpDirStr);
+ File libFile = new File(tmpDir, libName);
+ return FileUtils.copyResource(libURL, libFile, false);
+ }
+
+ private static File url2file(URL url, String fileName) {
+ if ("file".equals(url.getProtocol())) {
+ try {
+ File path = new File(URLDecoder.decode(url.getPath(), "UTF-8"));
+ return path;
+ } catch (UnsupportedEncodingException e) {
+ Logger.defaultLogError(e);
+ }
+ } else if ("jar".equals(url.getProtocol())) {
+ try {
+ File libFile = extractLib(url, fileName);
+ return libFile;
+ } catch (FileNotFoundException e) {
+ Logger.defaultLogError(e);
+ } catch (IOException e) {
+ Logger.defaultLogError(e);
+ }
+ } else {
+ System.err.println("Unsupported URL protocol '" + url + "' for FastLZ native library file '" + fileName);
+ }
+ return null;
+ }
+
+ private static class StringSource implements ISource {
+ private String src;
+ private ByteArrayInputStream baos;
+
+ public StringSource(String s) {
+ this.src = s;
+ this.baos = new ByteArrayInputStream(src.getBytes());
+ }
+
+ @Override
+ public int startPos() {
+ return 0;
+ }
+
+ @Override
+ public int startLine() {
+ return 0;
+ }
+
+ @Override
+ public InputStream open() throws IOException {
+ return baos;
+ }
+
+ @Override
+ public int length() throws IOException {
+ return src.length();
+ }
+
+ @Override
+ public String getName() {
+ return "Source";
+ }
+ }
+
+}
Code Review / simantics / platform.git / commitdiff