]> gerrit.simantics Code Review - simantics/platform.git/blobdiff - bundles/org.simantics.diagram/src/org/simantics/diagram/handler/Paster.java
Migrated source code from Simantics SVN
[simantics/platform.git] / bundles / org.simantics.diagram / src / org / simantics / diagram / handler / Paster.java
diff --git a/bundles/org.simantics.diagram/src/org/simantics/diagram/handler/Paster.java b/bundles/org.simantics.diagram/src/org/simantics/diagram/handler/Paster.java
new file mode 100644 (file)
index 0000000..a103ab8
--- /dev/null
@@ -0,0 +1,1358 @@
+package org.simantics.diagram.handler;\r
+\r
+import static org.simantics.diagram.handler.Paster.ComposedCutProcedure.compose;\r
+import gnu.trove.map.hash.THashMap;\r
+import gnu.trove.set.hash.THashSet;\r
+\r
+import java.awt.geom.AffineTransform;\r
+import java.awt.geom.Point2D;\r
+import java.util.ArrayDeque;\r
+import java.util.Collection;\r
+import java.util.Deque;\r
+import java.util.HashMap;\r
+import java.util.HashSet;\r
+import java.util.Map;\r
+import java.util.Queue;\r
+import java.util.Set;\r
+\r
+import org.simantics.databoard.Bindings;\r
+import org.simantics.db.ReadGraph;\r
+import org.simantics.db.Resource;\r
+import org.simantics.db.Session;\r
+import org.simantics.db.Statement;\r
+import org.simantics.db.WriteGraph;\r
+import org.simantics.db.common.CommentMetadata;\r
+import org.simantics.db.common.request.IndexRoot;\r
+import org.simantics.db.common.request.PossibleTypedParent;\r
+import org.simantics.db.common.request.WriteRequest;\r
+import org.simantics.db.common.utils.CommonDBUtils;\r
+import org.simantics.db.common.utils.NameUtils;\r
+import org.simantics.db.common.utils.OrderedSetUtils;\r
+import org.simantics.db.exception.DatabaseException;\r
+import org.simantics.db.layer0.util.RemoverUtil;\r
+import org.simantics.db.request.Write;\r
+import org.simantics.diagram.content.ConnectionUtil;\r
+import org.simantics.diagram.flag.DiagramFlagPreferences;\r
+import org.simantics.diagram.flag.FlagLabelingScheme;\r
+import org.simantics.diagram.flag.FlagUtil;\r
+import org.simantics.diagram.flag.IOTableUtil;\r
+import org.simantics.diagram.flag.IOTablesInfo;\r
+import org.simantics.diagram.handler.PasteOperation.ForceCopyReferences;\r
+import org.simantics.diagram.internal.DebugPolicy;\r
+import org.simantics.diagram.stubs.DiagramResource;\r
+import org.simantics.diagram.synchronization.CopyAdvisor;\r
+import org.simantics.diagram.synchronization.ErrorHandler;\r
+import org.simantics.diagram.synchronization.IModifiableSynchronizationContext;\r
+import org.simantics.diagram.synchronization.StatementEvaluation;\r
+import org.simantics.diagram.synchronization.SynchronizationException;\r
+import org.simantics.diagram.synchronization.SynchronizationHints;\r
+import org.simantics.diagram.synchronization.graph.AddConnection;\r
+import org.simantics.diagram.synchronization.graph.AddElement;\r
+import org.simantics.diagram.synchronization.graph.CopyAdvisorUtil;\r
+import org.simantics.diagram.synchronization.graph.DiagramGraphUtil;\r
+import org.simantics.diagram.synchronization.graph.GraphSynchronizationHints;\r
+import org.simantics.diagram.synchronization.graph.layer.GraphLayerManager;\r
+import org.simantics.g2d.element.IElement;\r
+import org.simantics.layer0.Layer0;\r
+import org.simantics.modeling.ModelingResources;\r
+import org.simantics.operation.Layer0X;\r
+import org.simantics.scl.runtime.tuple.Tuple2;\r
+import org.simantics.scl.runtime.tuple.Tuple3;\r
+import org.simantics.structural.stubs.StructuralResource2;\r
+import org.simantics.structural2.modelingRules.CPTerminal;\r
+import org.simantics.structural2.modelingRules.ConnectionJudgement;\r
+import org.simantics.structural2.modelingRules.IConnectionPoint;\r
+import org.simantics.utils.datastructures.BinaryFunction;\r
+import org.simantics.utils.datastructures.map.Tuple;\r
+\r
+/**\r
+ * @author Tuukka Lehtonen\r
+ */\r
+public class Paster {\r
+\r
+    private final boolean                           DEBUG = DebugPolicy.DEBUG_COPY_PASTE | true;\r
+\r
+    private final Session                           session;\r
+\r
+    private final PasteOperation                    op;\r
+\r
+    private final Resource                          sourceDiagram;\r
+\r
+    private final Resource                          targetDiagram;\r
+\r
+    private final IModifiableSynchronizationContext targetContext;\r
+\r
+    /**\r
+     * Set for the duration of the write.\r
+     */\r
+    private WriteGraph                              graph;\r
+    private ConnectionUtil                          cu;\r
+\r
+    private Layer0                                  L0;\r
+    private Layer0X                                 L0X;\r
+    private DiagramResource                         DIA;\r
+    private ModelingResources                       MOD;\r
+    private StructuralResource2                     STR;\r
+\r
+    /**\r
+     * A translating affine transform that can be pre-concatenated to existing\r
+     * affine transforms to move them around according to the paste operation\r
+     * offset specification.\r
+     */\r
+    private AffineTransform                         offsetTransform;\r
+    \r
+    /**\r
+     * A node map for post-processing copied resources\r
+     */\r
+    private NodeMap                                 nodeMap;\r
+\r
+    private Resource                                sourceRoot;\r
+    private Resource                                targetRoot;\r
+    private String                                  sourceRootUri;\r
+    private String                                  targetRootUri;\r
+    private boolean                                 operateWithinSameRoot;\r
+\r
+    /**\r
+     * @param session\r
+     * @param op\r
+     * @throws DatabaseException\r
+     */\r
+    public Paster(Session session, PasteOperation op) throws DatabaseException {\r
+        this.session = session;\r
+        this.op = op;\r
+\r
+        this.sourceDiagram = op.sourceDiagram;\r
+        this.targetDiagram = op.targetDiagram;\r
+        if (this.sourceDiagram == null)\r
+            throw new IllegalArgumentException("source diagram has no resource");\r
+        if (this.targetDiagram == null)\r
+            throw new IllegalArgumentException("target diagram has no resource");\r
+\r
+        this.targetContext = (IModifiableSynchronizationContext) op.target.getHint(SynchronizationHints.CONTEXT);\r
+        if (this.targetContext == null)\r
+            throw new IllegalArgumentException("target diagram has no synchronization context");\r
+\r
+        this.offsetTransform = AffineTransform.getTranslateInstance(op.offset.getX(), op.offset.getY());\r
+    }\r
+\r
+    private String toString(PasteOperation op) {\r
+        StringBuilder sb = new StringBuilder();\r
+        sb.append("Diagram paste ");\r
+        sb.append(op.ea.all.size());\r
+        sb.append(" element(s) ");\r
+        if (op.cut)\r
+            sb.append("cut");\r
+        else\r
+            sb.append("copied");\r
+        sb.append(" from ");\r
+        sb.append(op.sourceDiagram);\r
+        sb.append(" to ");\r
+        sb.append(op.targetDiagram);\r
+        return sb.toString();\r
+    }\r
+\r
+    public void perform() throws DatabaseException {\r
+        final String comment = toString(op);\r
+        Write request = new WriteRequest() {\r
+            @Override\r
+            public void perform(WriteGraph graph) throws DatabaseException {\r
+                graph.markUndoPoint();\r
+                Paster.this.perform(graph);\r
+                // Add comment to change set.\r
+                CommentMetadata cm = graph.getMetadata(CommentMetadata.class);\r
+                graph.addMetadata(cm.add(comment));\r
+            }\r
+        };\r
+        session.syncRequest(request);\r
+    }\r
+\r
+    public void perform(WriteGraph graph) throws DatabaseException {\r
+        L0 = Layer0.getInstance(graph);\r
+        L0X = Layer0X.getInstance(graph);\r
+        STR = StructuralResource2.getInstance(graph);\r
+        DIA = DiagramResource.getInstance(graph);\r
+        MOD = ModelingResources.getInstance(graph);\r
+        this.graph = graph;\r
+        this.cu = new ConnectionUtil(graph);\r
+        this.sourceRoot = graph.sync(new IndexRoot(sourceDiagram));\r
+        this.targetRoot = graph.sync(new IndexRoot(targetDiagram));\r
+        this.sourceRootUri = graph.getURI(sourceRoot);\r
+        this.targetRootUri = graph.getURI(targetRoot);\r
+        this.operateWithinSameRoot = sourceRoot.equals(targetRoot);\r
+        try {\r
+            if (op.cut)\r
+                cut();\r
+            else\r
+                copy();\r
+        } catch (DatabaseException e) {\r
+            throw e;\r
+        } catch (Exception e) {\r
+            throw new DatabaseException(e);\r
+        } finally {\r
+            this.cu = null;\r
+            this.graph = null;\r
+        }\r
+    }\r
+\r
+    private void onFinish() {\r
+        final CopyAdvisor advisor = op.target.getHint(SynchronizationHints.COPY_ADVISOR);\r
+        if (advisor != null) {\r
+            try {\r
+                targetContext.set(GraphSynchronizationHints.READ_TRANSACTION, graph);\r
+                targetContext.set(GraphSynchronizationHints.WRITE_TRANSACTION, graph);\r
+                advisor.onFinish(targetContext);\r
+            } catch (SynchronizationException e) {\r
+                ErrorHandler eh = targetContext.get(SynchronizationHints.ERROR_HANDLER);\r
+                eh.error(e.getMessage(), e);\r
+            } finally {\r
+                targetContext.set(GraphSynchronizationHints.READ_TRANSACTION, null);\r
+                targetContext.set(GraphSynchronizationHints.WRITE_TRANSACTION, null);\r
+            }\r
+        }\r
+    }\r
+\r
+    // ------------------------------------------------------------------------\r
+    // SIMPLIFICATIONS\r
+    // ------------------------------------------------------------------------\r
+\r
+    interface Procedure {\r
+        void execute(Resource resource) throws Exception;\r
+    }\r
+\r
+    public void forEachResourceElement(String description, Collection<?> elements, Procedure procedure)\r
+    throws Exception {\r
+        for (Object object : elements) {\r
+            if (object instanceof Resource) {\r
+                procedure.execute((Resource) object);\r
+            } else {\r
+                if (DEBUG) {\r
+                    System.out.println("[" + description + "] Skipping non-resource element: " + object);\r
+                }\r
+            }\r
+        }\r
+    }\r
+\r
+    private void applyPasteOffset(Resource forResource) throws DatabaseException {\r
+        applyOffset(forResource, op.offset);\r
+    }\r
+\r
+    private void applyOffset(Resource forResource, Point2D offset) throws DatabaseException {\r
+        AffineTransform at = DiagramGraphUtil.getTransform(graph, forResource);\r
+        at.preConcatenate(AffineTransform.getTranslateInstance(offset.getX(), offset.getY()));\r
+        DiagramGraphUtil.setTransform(graph, forResource, at);\r
+    }\r
+\r
+    private void applyPasteOffsetToRouteLine(Resource routeLine) throws DatabaseException {\r
+        Boolean isHorizontal = graph.getPossibleRelatedValue(routeLine, DIA.IsHorizontal, Bindings.BOOLEAN);\r
+        Double pos = graph.getPossibleRelatedValue(routeLine, DIA.HasPosition, Bindings.DOUBLE);\r
+        if (pos == null)\r
+            pos = 0.0;\r
+        if (Boolean.TRUE.equals(isHorizontal))\r
+            pos += op.offset.getY();\r
+        else\r
+            pos += op.offset.getX();\r
+        graph.claimLiteral(routeLine, DIA.HasPosition, pos, Bindings.DOUBLE);\r
+    }\r
+\r
+    // ------------------------------------------------------------------------\r
+    // CUT LOGIC\r
+    // ------------------------------------------------------------------------\r
+\r
+    Resource parentElement(Resource resource, Resource referenceRelation) throws DatabaseException {\r
+        // Only allow cutting if reference element has a parent and it is selected for cutting also.\r
+        Resource referencedParentComponent = graph.getPossibleObject(resource, referenceRelation);\r
+        if (referencedParentComponent == null)\r
+            return null;\r
+        return graph.getPossibleObject(referencedParentComponent, MOD.ComponentToElement);\r
+    }\r
+\r
+    boolean parentIsIncludedInCut(Resource resource, Resource referenceRelation, boolean noParentElementReturnValue) throws DatabaseException {\r
+        Resource referencedElement = parentElement(resource, referenceRelation);\r
+        if (referencedElement != null)\r
+            return op.ea.all.contains(referencedElement);\r
+        return noParentElementReturnValue;\r
+    }\r
+\r
+    private void cut() throws Exception {\r
+        final GraphLayerManager glm = targetContext.get(GraphSynchronizationHints.GRAPH_LAYER_MANAGER);\r
+\r
+        final THashSet<Resource> cutElements = new THashSet<Resource>();\r
+        final CutProcedure registerNames = new CutProcedure() {\r
+            void postCut(Resource resource, Object cutResult) throws Exception {\r
+                String name = graph.getPossibleRelatedValue(resource, L0.HasName, Bindings.STRING);\r
+                if (name != null) {\r
+                    cutElements.add(resource);\r
+                }\r
+            }\r
+        };\r
+\r
+        final CutProcedure nodeCutProcedure = new CutProcedure() {\r
+            @Override\r
+            void postCut(Resource resource, Object cutResult) throws Exception {\r
+                if (cutResult != null) {\r
+                    applyPasteOffset(resource);\r
+\r
+                    if (glm != null) {\r
+                        glm.removeFromAllLayers(graph, resource);\r
+                        glm.putElementOnVisibleLayers(op.target, graph, resource);\r
+                    }\r
+                }\r
+            }\r
+        };\r
+\r
+        CutProcedure flagCutProcedure = new CutProcedure() {\r
+            @Override\r
+            boolean preCut(Resource resource) throws Exception {\r
+                return nodeCutProcedure.preCut(resource);\r
+            }\r
+            @Override\r
+            void postCut(Resource resource, Object cutResult) throws Exception {\r
+                nodeCutProcedure.postCut(resource, cutResult);\r
+\r
+                if (FlagUtil.isJoinedInSingleDiagram(graph, resource)) {\r
+                    FlagLabelingScheme scheme = DiagramFlagPreferences.getActiveFlagLabelingScheme(graph);\r
+                    String commonLabel = scheme.generateLabel(graph, targetDiagram);\r
+                    graph.claimLiteral(resource, L0.HasLabel, DIA.FlagLabel, commonLabel);\r
+                    for (Resource otherFlag : FlagUtil.getCounterparts(graph, resource))\r
+                        graph.claimLiteral(otherFlag, L0.HasLabel, DIA.FlagLabel, commonLabel, Bindings.STRING);\r
+                }\r
+\r
+                IOTablesInfo ioTablesInfo = IOTableUtil.getIOTablesInfo(graph, op.targetDiagram);\r
+                double[] transform = graph.getRelatedValue(resource, DIA.HasTransform, Bindings.DOUBLE_ARRAY);\r
+                ioTablesInfo.updateBinding(graph, DIA, resource, transform[4], transform[5]);\r
+\r
+                // #11077: fix STR.JoinsComposite relations from joins related to moved flags.\r
+                // Otherwise the JoinsComposite relations will be wrong after the cut-operation.\r
+                for (Resource join : graph.getObjects(resource, DIA.FlagIsJoinedBy))\r
+                    fixConnectionJoin(join);\r
+            }\r
+\r
+            Set<Resource> flagComposites = new HashSet<>();\r
+            Set<Resource> joinedComposites = new HashSet<>();\r
+            Set<Resource> invalidJoinedComposites = new HashSet<>();\r
+\r
+            void fixConnectionJoin(Resource join) throws DatabaseException {\r
+                Collection<Resource> flags = graph.getObjects(join, DIA.JoinsFlag);\r
+                if (flags.size() < 2) {\r
+                    // Broken join, remove it. Joins that have\r
+                    // < 2 flags attached to it shouldn't exist.\r
+                    graph.deny(join);\r
+                } else {\r
+                    flagComposites.clear();\r
+                    possibleCompositesOfElements(flags, flagComposites);\r
+                    joinedComposites.clear();\r
+                    joinedComposites.addAll( graph.getObjects(join, STR.JoinsComposite) );\r
+\r
+                    // Calculate which JoinsComposites need to be added and which removed.\r
+                    invalidJoinedComposites.clear();\r
+                    invalidJoinedComposites.addAll(joinedComposites);\r
+                    invalidJoinedComposites.removeAll(flagComposites);\r
+                    flagComposites.removeAll(joinedComposites);\r
+\r
+                    if (!invalidJoinedComposites.isEmpty()) {\r
+                        for (Resource invalidComposite : invalidJoinedComposites)\r
+                            graph.deny(join, STR.JoinsComposite, invalidComposite);\r
+                    }\r
+                    if (!flagComposites.isEmpty()) {\r
+                        for (Resource joinedComposite : flagComposites)\r
+                            graph.claim(join, STR.JoinsComposite, joinedComposite);\r
+                    }\r
+                }\r
+            }\r
+\r
+            Set<Resource> possibleCompositesOfElements(Collection<Resource> elements, Set<Resource> result) throws DatabaseException {\r
+                for (Resource e : elements) {\r
+                    Resource composite = possibleCompositeOfElement(e);\r
+                    if (composite != null)\r
+                        result.add(composite);\r
+                }\r
+                return result;\r
+            }\r
+\r
+            Resource possibleCompositeOfElement(Resource element) throws DatabaseException {\r
+                Resource diagram = graph.getPossibleObject(element, L0.PartOf);\r
+                return diagram != null ? graph.getPossibleObject(diagram, MOD.DiagramToComposite) : null;\r
+            }\r
+        };\r
+\r
+        CutProcedure monitorCutProcedure = new CutProcedure() {\r
+            @Override\r
+            void postCut(Resource resource, Object cutResult) throws DatabaseException {\r
+                if (cutResult != null) {\r
+                    Resource parentElement = parentElement(resource, DIA.HasMonitorComponent);\r
+                    if (parentElement == null) {\r
+                        applyPasteOffset(resource);\r
+                    } else if (!op.ea.all.contains(parentElement)) {\r
+                        Point2D offset = op.offset;\r
+                        if (!op.sameDiagram()) {\r
+                            Resource parentDiagram = graph.sync(new PossibleTypedParent(parentElement, DIA.Diagram));\r
+                            AffineTransform monitoredComponentTr = DiagramGraphUtil.getWorldTransform(graph, parentElement);\r
+                            if (op.targetDiagram.equals(parentDiagram)) {\r
+                                // Monitor is moved back to the parent element diagram.\r
+                                // Must make monitor position relative to the parent position.\r
+                                offset = new Point2D.Double(\r
+                                        op.offset.getX() - monitoredComponentTr.getTranslateX(),\r
+                                        op.offset.getY() - monitoredComponentTr.getTranslateY());\r
+                            } else {\r
+                                // Monitor is moved to another diagram than the parent element diagram.\r
+                                // Must make monitor position absolute.\r
+                                offset = new Point2D.Double(\r
+                                        op.offset.getX() + monitoredComponentTr.getTranslateX(),\r
+                                        op.offset.getY() + monitoredComponentTr.getTranslateY());\r
+                            }\r
+                        }\r
+                        applyOffset(resource, offset);\r
+                    }\r
+\r
+                    if (glm != null) {\r
+                        glm.removeFromAllLayers(graph, resource);\r
+                        glm.putElementOnVisibleLayers(op.target, graph, resource);\r
+                    }\r
+                }\r
+            }\r
+        };\r
+\r
+        CutProcedure referenceElementCutProcedure = new CutProcedure() {\r
+            @Override\r
+            boolean preCut(Resource resource) throws DatabaseException {\r
+                // Only allow cutting if reference element has a parent and it is selected for cutting also.\r
+                return parentIsIncludedInCut(resource, MOD.HasParentComponent, true);\r
+            }\r
+            @Override\r
+            void postCut(Resource resource, Object cutResult) throws Exception {\r
+                if (cutResult != null) {\r
+                    if (!parentIsIncludedInCut(resource, MOD.HasParentComponent, false)) {\r
+                        applyPasteOffset(resource);\r
+                    }\r
+\r
+                    if (glm != null) {\r
+                        glm.removeFromAllLayers(graph, resource);\r
+                        glm.putElementOnVisibleLayers(op.target, graph, resource);\r
+                    }\r
+                }\r
+            }\r
+        };\r
+\r
+        CutProcedure connectionCutProcedure = new CutProcedure() {\r
+            @Override\r
+            void postCut(Resource resource, Object cutResult) throws Exception {\r
+                if (cutResult != null) {\r
+                    for (Resource rn : graph.getObjects(resource, DIA.HasInteriorRouteNode)) {\r
+                        if (graph.isInstanceOf(rn, DIA.BranchPoint))\r
+                            applyPasteOffset(rn);\r
+                        else if (graph.isInstanceOf(rn, DIA.RouteLine))\r
+                            applyPasteOffsetToRouteLine(rn);\r
+                    }\r
+\r
+                    if (glm != null) {\r
+                        glm.removeFromAllLayers(graph, resource);\r
+                        glm.putElementOnVisibleLayers(op.target, graph, resource);\r
+                    }\r
+                }\r
+            }\r
+        };\r
+\r
+        // Before cutting, disconnect all nodes from connections that are not in\r
+        // the cut connection set.\r
+\r
+        final Set<Resource> selectedConnections = new HashSet<Resource>();\r
+        forEachResourceElement("Gather connections", op.ea.connections, new Procedure() {\r
+            @Override\r
+            public void execute(Resource resource) throws Exception {\r
+                selectedConnections.add(resource);\r
+            }\r
+        });\r
+\r
+        Set<Resource> affectedConnections = new HashSet<Resource>();\r
+        disconnectExcludedConnections("Disconnect Nodes", op.ea.nodeList, selectedConnections, affectedConnections);\r
+        disconnectExcludedConnections("Disconnect Flags", op.ea.flags, selectedConnections, affectedConnections);\r
+\r
+        for (Resource connection : affectedConnections) {\r
+            // Leave the connection only if it has:\r
+            //  - at least one truly connected :DIA.Connector\r
+            //  - at least 1 route/branch points\r
+            int connectedConnectors = cu.getConnectedConnectors(connection, null).size();\r
+            int branchPoints = cu.getBranchPoints(connection, null).size();\r
+            if (connectedConnectors > 0 && branchPoints > 0)\r
+                continue;\r
+\r
+            // Remove the whole connection.\r
+            cu.removeConnection(connection);\r
+        }\r
+\r
+        cut("Cut Nodes", op.ea.nodeList, compose(nodeCutProcedure, registerNames));\r
+        cut("Cut Others", op.ea.others, compose(nodeCutProcedure, registerNames));\r
+        // Cut reference elements after nodes so that parent relationships can be restored\r
+        // but before connections so that connections to the reference elements can be copied.\r
+        cut("Cut References", op.ea.references, compose(referenceElementCutProcedure, registerNames));\r
+        cut("Cut Flags", op.ea.flags, compose(flagCutProcedure, registerNames));\r
+        cut("Cut Connections", op.ea.connections, compose(connectionCutProcedure, registerNames));\r
+        cut("Cut Monitors", op.ea.monitors, compose(monitorCutProcedure, registerNames));\r
+\r
+        // Make sure that all the pasted nodes have unique names in their new namespace.\r
+        // Element names are only diagram-locally unique so this must be done after cut-paste.\r
+        for (Resource element : cutElements)\r
+            AddElement.claimFreshElementName(graph, targetDiagram, element);\r
+\r
+        onFinish();\r
+    }\r
+\r
+    /**\r
+     * @param description\r
+     * @param nodes\r
+     * @param affectedConnections\r
+     * @return\r
+     * @throws Exception\r
+     */\r
+    private Set<Resource> disconnectExcludedConnections(String description, Collection<Resource> nodes,\r
+            final Set<Resource> selectedConnections, final Set<Resource> affectedConnections) throws Exception {\r
+        final StructuralResource2 str = StructuralResource2.getInstance(graph);\r
+\r
+        // Disconnect each connection that is not a part of selectedConnections\r
+        // but is attached to the listed nodes.\r
+        forEachResourceElement(description, nodes, new Procedure() {\r
+            @Override\r
+            public void execute(Resource resource) throws Exception {\r
+                for (Resource connector : graph.getObjects(resource, str.IsConnectedTo)) {\r
+                    Resource connection = ConnectionUtil.tryGetConnection(graph, connector);\r
+                    if (connection == null) {\r
+                        // This is a stray connector that has no purpose and should be removed.\r
+                        cu.removeConnectionPart(connector);\r
+                        continue;\r
+                    }\r
+                    if (selectedConnections.contains(connection))\r
+                        continue;\r
+\r
+                    cu.removeConnectionPart(connector);\r
+                    affectedConnections.add(connection);\r
+                }\r
+            }\r
+        });\r
+\r
+        return affectedConnections;\r
+    }\r
+\r
+    /**\r
+     * @param description\r
+     * @param elements\r
+     * @param cutProcedure custom pre- and post-cut processing, may be <code>null</code>\r
+     * @throws Exception\r
+     */\r
+    private void cut(final String description, Collection<Resource> elements, final CutProcedure cutProcedure)\r
+    throws Exception {\r
+        final CopyAdvisor advisor = op.target.getHint(SynchronizationHints.COPY_ADVISOR);\r
+\r
+        forEachResourceElement(description, elements, new Procedure() {\r
+            @Override\r
+            public void execute(Resource resource) throws Exception {\r
+                if (DEBUG)\r
+                    System.out.println("[" + description + "] " + NameUtils.getSafeName(graph, resource, true));\r
+\r
+                if (cutProcedure != null && !cutProcedure.preCut(resource)) {\r
+                    if (DEBUG)\r
+                        System.out.println("[" + description + "] ignoring element cut for " + NameUtils.getSafeName(graph, resource, true));\r
+                    return;\r
+                }\r
+\r
+                Object result = CopyAdvisorUtil.cut(targetContext, graph, advisor, resource, sourceDiagram, targetDiagram);\r
+\r
+                if (DEBUG)\r
+                    System.out.println("[" + description + "] RESULT: " + result);\r
+\r
+                if (cutProcedure != null)\r
+                    cutProcedure.postCut(resource, result);\r
+            }\r
+        });\r
+    }\r
+\r
+    static class CutProcedure {\r
+        boolean preCut(Resource resource) throws Exception { return true; }\r
+        void postCut(Resource resource, Object cutResult) throws Exception {}\r
+    }\r
+\r
+    static class ComposedCutProcedure extends CutProcedure {\r
+        private final CutProcedure[] procedures;\r
+\r
+        public static ComposedCutProcedure compose(CutProcedure... procedures) {\r
+            return new ComposedCutProcedure(procedures);\r
+        }\r
+\r
+        public ComposedCutProcedure(CutProcedure... procedures) {\r
+            this.procedures = procedures;\r
+        }\r
+\r
+        boolean preCut(Resource resource) throws Exception {\r
+            for (CutProcedure proc : procedures)\r
+                if (!proc.preCut(resource))\r
+                    return false;\r
+            return true;\r
+        }\r
+        void postCut(Resource resource, Object cutResult) throws Exception {\r
+            for (CutProcedure proc : procedures)\r
+                proc.postCut(resource, cutResult);\r
+        }\r
+    }\r
+\r
+    // ------------------------------------------------------------------------\r
+    // COPY LOGIC SUPPORT CLASSES\r
+    // ------------------------------------------------------------------------\r
+\r
+    static class IdentifiedElement extends Tuple {\r
+        public IdentifiedElement(Resource object, IElement element) {\r
+            super(object, element);\r
+        }\r
+        public Resource getObject() {\r
+            return (Resource) getField(0);\r
+        }\r
+        public IElement getElement() {\r
+            return (IElement) getField(1);\r
+        }\r
+    }\r
+\r
+    static public class NodeMap {\r
+\r
+        Map<Resource, IdentifiedElement> resourceMap = new HashMap<Resource, IdentifiedElement>();\r
+        Map<IElement, IdentifiedElement> elementMap  = new HashMap<IElement, IdentifiedElement>();\r
+\r
+        public void put(Resource sourceResource, IElement sourceElement, IdentifiedElement dst) {\r
+            if (sourceResource == null)\r
+                throw new NullPointerException("null source resource");\r
+            resourceMap.put(sourceResource, dst);\r
+            if (sourceElement != null)\r
+                elementMap.put(sourceElement, dst);\r
+        }\r
+\r
+        public IdentifiedElement get(Resource source) {\r
+            return resourceMap.get(source);\r
+        }\r
+\r
+        public IdentifiedElement get(IElement source) {\r
+            return elementMap.get(source);\r
+        }\r
+        \r
+        public Set<Resource> allResources() {\r
+            return resourceMap.keySet();\r
+        }\r
+        \r
+        public Resource getResource(Resource source) {\r
+            IdentifiedElement ie = resourceMap.get(source);\r
+            if(ie != null)\r
+                return ie.getObject();\r
+            else \r
+                return null;\r
+        }\r
+\r
+        public Resource getResource(IElement source) {\r
+            IdentifiedElement ie =  elementMap.get(source);\r
+            if(ie != null)\r
+                return ie.getObject();\r
+            else \r
+                return null;\r
+        }\r
+        \r
+    }\r
+\r
+    static class ResourceMap extends HashMap<Resource, Resource> {\r
+        private static final long serialVersionUID = 687528035082504835L;\r
+    }\r
+\r
+    static class StatementMap extends HashMap<Resource, Statement> {\r
+        private static final long serialVersionUID = 8520092255776208395L;\r
+    }\r
+\r
+    static class MapQueue<K,V> {\r
+        Map<K, Deque<V>> map = new HashMap<K, Deque<V>>();\r
+        public void offer(K key, V value) {\r
+            Deque<V> deque = map.get(key);\r
+            if (deque == null)\r
+                map.put(key, deque = new ArrayDeque<V>());\r
+            deque.offer(value);\r
+        }\r
+        public V poll(K key) {\r
+            Deque<V> deque = map.get(key);\r
+            if (deque == null)\r
+                return null;\r
+            V value = deque.poll();\r
+            if (deque.isEmpty())\r
+                map.remove(key);\r
+            return value;\r
+        }\r
+    }\r
+\r
+    // ------------------------------------------------------------------------\r
+    // COPY LOGIC\r
+    // ------------------------------------------------------------------------\r
+\r
+    /**\r
+     * This is necessary to have DIA.Flag type copied over to the copied flag.\r
+     * Diagram mapping will have problems and potentially break the\r
+     * configuration if the type is not the same as in the source.\r
+     */\r
+    BinaryFunction<StatementEvaluation, ReadGraph, Statement> statementAdvisor =\r
+            new BinaryFunction<StatementEvaluation, ReadGraph, Statement>() {\r
+        @Override\r
+        public StatementEvaluation call(ReadGraph graph, Statement stm) {\r
+            if (DIA.HasFlagType.equals(stm.getPredicate()))\r
+                return StatementEvaluation.INCLUDE;\r
+            return StatementEvaluation.USE_DEFAULT;\r
+        }\r
+    };\r
+\r
+    CopyProcedure nodeCopyProcedure = new CopyProcedure() {\r
+        Resource copy(Resource source) throws Exception {\r
+            Layer0 L0 = Layer0.getInstance(graph);\r
+\r
+            Resource copy = null;\r
+            final CopyAdvisor advisor = op.target.getHint(SynchronizationHints.COPY_ADVISOR);\r
+            if (advisor != null) {\r
+                Resource sourceComposite = graph.getPossibleObject(source, L0.PartOf);\r
+                if (sourceComposite == null || !graph.isInstanceOf(source, DIA.Composite)) {\r
+                    DiagramResource DIA = DiagramResource.getInstance(graph);\r
+                    sourceComposite = OrderedSetUtils.getSingleOwnerList(graph, source, DIA.Composite);\r
+                }\r
+                copy = CopyAdvisorUtil.copy(targetContext, graph, advisor, source, sourceComposite, op.targetDiagram);\r
+            }\r
+\r
+            if (copy == null) {\r
+                copy = CopyAdvisorUtil.copy2(graph, source, statementAdvisor);\r
+            }\r
+\r
+            graph.deny(copy, MOD.IsTemplatized, copy);\r
+\r
+            // Add comment to change set.\r
+            CommentMetadata cm = graph.getMetadata(CommentMetadata.class);\r
+            graph.addMetadata(cm.add("Copied element " + source + " to " + copy));\r
+\r
+            // Add the new element to the diagram composite\r
+            OrderedSetUtils.add(graph, op.targetDiagram, copy);\r
+\r
+            // Give running name to element and increment the counter attached to the diagram.\r
+            AddElement.claimFreshElementName(graph, op.targetDiagram, copy);\r
+\r
+            // Make the diagram consist of the new element\r
+            graph.claim(op.targetDiagram, L0.ConsistsOf, copy);\r
+\r
+            // Put the element on all the currently active layers if possible.\r
+            GraphLayerManager glm = targetContext.get(GraphSynchronizationHints.GRAPH_LAYER_MANAGER);\r
+            if (glm != null) {\r
+                glm.removeFromAllLayers(graph, copy);\r
+                glm.putElementOnVisibleLayers(op.target, graph, copy);\r
+            }\r
+\r
+            return copy;\r
+        }\r
+        @Override\r
+        void postCopy(Resource source, Resource copy) throws Exception {\r
+            CopyPasteUtil.copyElementPosition(graph, op.ctx, source, copy, op.offset);\r
+        }\r
+    };\r
+\r
+    private void copy() throws Exception {\r
+        nodeMap = new NodeMap();\r
+        \r
+        CommonDBUtils.selectClusterSet(graph, targetDiagram);\r
+\r
+        // Fill nodeMap with initial Resource->Resource mappings\r
+        if (op.initialNodeMap != null) {\r
+            for (Map.Entry<Resource, Resource> entry : op.initialNodeMap.entrySet()) {\r
+                nodeMap.put(entry.getKey(), null, new IdentifiedElement(entry.getValue(), null));\r
+            }\r
+        }\r
+\r
+        // Perform copies in a suitable order\r
+        copyNodes( nodeMap );\r
+        // Copy reference elements after nodes so that parent relationships can be restored\r
+        // but before connections so that connections to the reference elements can be copied.\r
+        copyReferences( nodeMap );\r
+        copyFlags( nodeMap );\r
+        copyConnections( nodeMap );\r
+        // Copy monitors last since their parents must have been copied already.\r
+        copyMonitors( nodeMap );\r
+\r
+        onFinish();\r
+    }\r
+    \r
+\r
+    private NodeMap copyNodes(final NodeMap nodeMap) throws Exception {\r
+        copy("Copy Others", op.ea.others, nodeMap, nodeCopyProcedure);\r
+        copy("Copy Nodes", op.ea.nodeList, nodeMap, nodeCopyProcedure);\r
+\r
+        return nodeMap;\r
+    }\r
+\r
+    private NodeMap copyReferences(final NodeMap nodeMap) throws Exception {\r
+        final boolean forceCopyReferences = op.hasOption(ForceCopyReferences.class);\r
+\r
+        copy("Copy References", op.ea.references, nodeMap, new CopyProcedure() {\r
+            @Override\r
+            Resource copy(Resource source) throws Exception {\r
+                // Don't copy unless the parent component is copied too.\r
+                Resource sourceParentComponent = graph.getPossibleObject(source, MOD.HasParentComponent);\r
+                if (sourceParentComponent == null)\r
+                    return null;\r
+                Resource sourceParentElement = graph.getPossibleObject(sourceParentComponent, MOD.ComponentToElement);\r
+                if (sourceParentElement != null) {\r
+                    if (!forceCopyReferences && !op.ea.all.contains(sourceParentElement))\r
+                        return null;\r
+                    // Find copied component\r
+                    IdentifiedElement copiedParentElement = nodeMap.get(sourceParentElement);\r
+                    if (copiedParentElement == null)\r
+                        return null;\r
+                    Resource copiedParentComponent = graph.getPossibleObject(copiedParentElement.getObject(), MOD.ElementToComponent);\r
+                    if (copiedParentComponent == null)\r
+                        return null;\r
+                    return copyReference(source, copiedParentComponent);\r
+                } else {\r
+                    // Check that the component is part of a diagramless composite before proceeding\r
+                    Resource partOf = graph.getPossibleObject(sourceParentComponent, L0.PartOf);\r
+                    if (partOf == null || graph.hasStatement(partOf, MOD.CompositeToDiagram))\r
+                        return null;\r
+                    // Resolve the matching parent component from the target context.\r
+                    Resource targetParentComponent = resolveTargetComponent(sourceParentComponent);\r
+                    if (targetParentComponent == null)\r
+                        return null;\r
+                    return copyReference(source, targetParentComponent);\r
+                }\r
+            }\r
+\r
+            private Resource resolveTargetComponent(Resource sourceParentComponent) throws DatabaseException {\r
+                if (operateWithinSameRoot)\r
+                    return sourceParentComponent;\r
+                // Directly map relative source component URI into target root namespace.\r
+                String sourceUri = graph.getURI(sourceParentComponent);\r
+                String targetUri = sourceUri.replace(sourceRootUri, targetRootUri);\r
+                Resource targetParentComponent = graph.getPossibleResource(targetUri);\r
+                return targetParentComponent;\r
+            }\r
+\r
+            private Resource copyReference(Resource source, Resource parentComponent) throws Exception {\r
+                Resource referenceRelation = graph.getPossibleObject(source, MOD.HasReferenceRelation);\r
+                if (referenceRelation == null)\r
+                    return null;\r
+\r
+                Resource relationCopy = CopyAdvisorUtil.copy4(graph, referenceRelation);\r
+                if (relationCopy == null)\r
+                    return null;\r
+\r
+                Resource copy = nodeCopyProcedure.copy(source);\r
+\r
+                // WORKAROUND: The result consists of a badly copied reference relation.\r
+                // Remove it. How the relation is copied depends on whether the copy target\r
+                // is the same model or not. If it is, the relation is copied, but invalidly\r
+                // and if the target is not the same model, the relation is simply referenced\r
+                // with a uni-directional L0.ConsistsOf relation.\r
+                for (Resource o : graph.getObjects(copy, L0.ConsistsOf)) {\r
+                    boolean ownedByCopy = graph.hasStatement(o, L0.PartOf, copy);\r
+                    if (ownedByCopy) {\r
+                        graph.deny(copy, L0.ConsistsOf, o);\r
+                        RemoverUtil.remove(graph, o);\r
+                    } else {\r
+                        graph.deny(copy, L0.ConsistsOf, o);\r
+                    }\r
+                }\r
+\r
+                // The element the copied reference is attached to was also copied.\r
+                // This means that we must attach the copied reference to its\r
+                // original component's copy.\r
+                graph.deny(copy, MOD.HasParentComponent);\r
+                if(parentComponent != null)\r
+                    graph.claim(copy, MOD.HasParentComponent, MOD.HasParentComponent_Inverse, parentComponent);\r
+\r
+                // Attach reference relation\r
+                graph.claim(copy, L0.ConsistsOf, L0.PartOf, relationCopy);\r
+                graph.claim(copy, MOD.HasReferenceRelation, MOD.HasReferenceRelation_Inverse, relationCopy);\r
+\r
+                return copy;\r
+            }\r
+\r
+            @Override\r
+            void postCopy(Resource source, Resource copy) throws Exception {\r
+                // Must fix element position if the copied reference element\r
+                // doesn't have a visible parent element.\r
+                Resource parentComponent = graph.getPossibleObject(source, MOD.HasParentComponent);\r
+                if (parentComponent == null)\r
+                    return;\r
+                Resource parentElement = graph.getPossibleObject(parentComponent, MOD.ComponentToElement);\r
+                if (parentElement == null)\r
+                    CopyPasteUtil.copyElementPosition(graph, op.ctx, source, copy, op.offset);\r
+            }\r
+        });\r
+\r
+        return nodeMap;\r
+    }\r
+\r
+    private NodeMap copyFlags(NodeMap nodeMap) throws Exception {\r
+        final Layer0 l0 = Layer0.getInstance(graph);\r
+        final DiagramResource dia = DiagramResource.getInstance(graph);\r
+\r
+        class FlagCopy {\r
+            private final Map<Resource, Resource> selectedFlags           = new HashMap<Resource, Resource>();\r
+            private final Map<Resource, Resource> flagSelectedCounterpart = new HashMap<Resource, Resource>();\r
+\r
+            /**\r
+             * Analyze which flag pairs are selected\r
+             * \r
+             * @throws DatabaseException\r
+             */\r
+            private void analyzeFlagSelection() throws DatabaseException {\r
+                for (Resource flag : op.ea.flags) {\r
+                    selectedFlags.put(flag, flag);\r
+                }\r
+                for (Resource flag : selectedFlags.keySet()) {\r
+                    boolean external = FlagUtil.isExternal(graph, flag);\r
+                    boolean inSingleDiagram = FlagUtil.isJoinedInSingleDiagram(graph, flag);\r
+                    if (!external && inSingleDiagram) {\r
+                        Resource counterpart = FlagUtil.getPossibleCounterpart(graph, flag);\r
+                        if (selectedFlags.containsKey(counterpart)) {\r
+                            flagSelectedCounterpart.put(flag, counterpart);\r
+                            flagSelectedCounterpart.put(counterpart, flag);\r
+                        }\r
+                    }\r
+                }\r
+            }\r
+\r
+            /**\r
+             * Reconnect copied flag pairs.\r
+             * @throws DatabaseException\r
+             */\r
+            private void reconnectLocalFlagPairs(NodeMap nodeMap) throws DatabaseException {\r
+                FlagLabelingScheme scheme = DiagramFlagPreferences.getActiveFlagLabelingScheme(graph);\r
+                Resource diagram = op.targetDiagram;\r
+\r
+                Set<Resource> visited = new HashSet<Resource>();\r
+                ArrayDeque<Resource> queue = new ArrayDeque<Resource>(flagSelectedCounterpart.values());\r
+                while (!queue.isEmpty()) {\r
+                    Resource flag = queue.poll();\r
+                    Resource counterpart = flagSelectedCounterpart.get(flag);\r
+                    if (!visited.add(flag) || !visited.add(counterpart) || counterpart == null)\r
+                        continue;\r
+\r
+                    // Get copies\r
+                    Resource flagSourceElement = selectedFlags.get(flag);\r
+                    Resource counterpartSourceElement = selectedFlags.get(counterpart);\r
+\r
+                    IdentifiedElement flagCopy = nodeMap.get(flagSourceElement);\r
+                    IdentifiedElement counterpartCopy = nodeMap.get(counterpartSourceElement);\r
+\r
+                    FlagUtil.join(graph, flagCopy.getObject(), counterpartCopy.getObject());\r
+\r
+                    // Provide fresh labeling for connected flags if possible\r
+                    if (scheme != null) {\r
+                        String label = scheme.generateLabel(graph, diagram);\r
+                        if (label != null) {\r
+                            graph.claimLiteral(flagCopy.getObject(), l0.HasLabel, dia.FlagLabel, label, Bindings.STRING);\r
+                            graph.claimLiteral(counterpartCopy.getObject(), l0.HasLabel, dia.FlagLabel, label, Bindings.STRING);\r
+                        }\r
+                    }\r
+                }\r
+            }\r
+\r
+            public void perform(NodeMap nodeMap) throws Exception {\r
+                analyzeFlagSelection();\r
+\r
+                copy("Copy Flags", op.ea.flags, nodeMap, new CopyProcedure() {\r
+                    @Override\r
+                    Resource copy(Resource source) throws Exception {\r
+                        return nodeCopyProcedure.copy(source);\r
+                    }\r
+                    @Override\r
+                    public void postCopy(Resource source, Resource copy) throws Exception {\r
+                        AffineTransform at = CopyPasteUtil.copyElementPosition(graph, op.ctx, source, copy, op.offset);\r
+                        \r
+                        // Update flag table binding\r
+                        IOTablesInfo ioTablesInfo = IOTableUtil.getIOTablesInfo(graph, op.targetDiagram);\r
+                        ioTablesInfo.updateBinding(graph, DIA, copy, at.getTranslateX(), at.getTranslateY());\r
+                        \r
+                        // All label properties must be removed from\r
+                        // the copied flags. Disconnected flags are\r
+                        // not supposed to have labels, and the right\r
+                        // place to reset the labels is when the flags\r
+                        // are reconnected to their respective\r
+                        // counterparts.\r
+                        graph.denyValue(copy, l0.HasLabel);\r
+                    }\r
+                });\r
+\r
+                reconnectLocalFlagPairs(nodeMap);\r
+            }\r
+\r
+        }\r
+\r
+        new FlagCopy().perform( nodeMap );\r
+        return nodeMap;\r
+    }\r
+\r
+    private NodeMap copyMonitors(final NodeMap nodeMap) throws Exception {\r
+        copy("Copy Monitors", op.ea.monitors, nodeMap, new CopyProcedure() {\r
+            @Override\r
+            Resource copy(Resource source) throws Exception {\r
+                // Don't copy monitors if they are copied without\r
+                // their parent element into another root (model).\r
+                if (!operateWithinSameRoot) {\r
+                    Resource monitorComponent = graph.getPossibleObject(source, DIA.HasMonitorComponent);\r
+                    if (monitorComponent != null) {\r
+                        Resource monitorElement = graph.getPossibleObject(monitorComponent, MOD.ComponentToElement);\r
+                        if (monitorElement == null || !op.ea.all.contains(monitorElement))\r
+                            return null;\r
+                    }\r
+                }\r
+                Resource copy = nodeCopyProcedure.copy(source);\r
+                return copy;\r
+            }\r
+            @Override\r
+            void postCopy(Resource source, Resource copy) throws Exception {\r
+                // Find the component and diagram element the source monitor is\r
+                // connected to.\r
+                Resource monitorElement = null;\r
+                Resource monitorComponent = graph.getPossibleObject(source, DIA.HasMonitorComponent);\r
+                if (monitorComponent != null) {\r
+                    monitorElement = graph.getPossibleObject(monitorComponent, MOD.ComponentToElement);\r
+                }\r
+\r
+                if (monitorElement != null && op.ea.all.contains(monitorElement)) {\r
+                    // The element the copied monitor is attached was also copied.\r
+                    // This means that we must attach the copied monitor to its\r
+                    // original components copy.\r
+\r
+                    // Remove old association\r
+                    graph.deny(copy, DIA.HasMonitorComponent);\r
+\r
+                    // Associate to copied component\r
+                    IdentifiedElement parent = nodeMap.get(monitorElement);\r
+                    if (parent != null) {\r
+                        monitorComponent = graph.getPossibleObject(parent.getObject(), MOD.ElementToComponent);\r
+                        if (monitorComponent != null)\r
+                            graph.claim(copy, DIA.HasMonitorComponent, monitorComponent);\r
+                    } else {\r
+                        //throw new PasteException("no parent could be found for monitored element " + monitoredElement);\r
+                    }\r
+                } else {\r
+                    // The element the copied monitor is attached was not copied\r
+                    // or there is no element for the monitored component.\r
+                    // This means that the copied monitor must be kept attached\r
+                    // to the same component no matter where it is in the model,\r
+                    // unless the copy is done into another model.\r
+                    if (operateWithinSameRoot && monitorComponent != null)\r
+                        graph.claim(copy, DIA.HasMonitorComponent, monitorComponent);\r
+\r
+                    Point2D offset = op.offset;\r
+                    if (!op.sameDiagram()) {\r
+                        if (monitorElement != null) {\r
+                            // Monitor doesn't have a diagram parent element any\r
+                            // more, must recalculate its offset.\r
+                            AffineTransform monitoredComponentTr = DiagramGraphUtil.getWorldTransform(graph, monitorElement);\r
+                            offset = new Point2D.Double(\r
+                                    op.offset.getX() + monitoredComponentTr.getTranslateX(),\r
+                                    op.offset.getY() + monitoredComponentTr.getTranslateY());\r
+                        }\r
+                    }\r
+                    CopyPasteUtil.copyElementPosition(graph, op.ctx, source, copy, offset);\r
+                }\r
+\r
+                // Copy monitor suffix from original to copy.\r
+                String monitorSuffix = graph.getPossibleRelatedValue(source, DIA.HasMonitorSuffix, Bindings.STRING);\r
+                if (monitorSuffix != null)\r
+                    graph.claimLiteral(copy, DIA.HasMonitorSuffix, monitorSuffix, Bindings.STRING);\r
+\r
+                // Copy used property obtains for monitor template data.\r
+                graph.deny(copy, L0X.ObtainsProperty);\r
+                for (Statement stm : graph.getStatements(source, L0X.ObtainsProperty)) {\r
+                    graph.claim(copy, stm.getPredicate(), null, stm.getObject());\r
+                }\r
+            }\r
+        });\r
+\r
+        return nodeMap;\r
+    }\r
+\r
+    /**\r
+     * @param description\r
+     * @param elements\r
+     * @param nodeMap\r
+     * @param copyProcedure\r
+     * @throws Exception\r
+     */\r
+    private void copy(final String description, Collection<Resource> elements, final NodeMap nodeMap,\r
+            final CopyProcedure copyProcedure) throws Exception {\r
+        if (copyProcedure == null)\r
+            throw new IllegalArgumentException("null copy procedure");\r
+\r
+        forEachResourceElement(description, elements, new Procedure() {\r
+            @Override\r
+            public void execute(Resource resource) throws Exception {\r
+                if (DEBUG)\r
+                    System.out.println("[" + description + "] " + NameUtils.getSafeName(graph, resource, true));\r
+                Resource copy = copyProcedure.copy(resource);\r
+                if (copy != null) {\r
+                    if (DEBUG)\r
+                        System.out.println("[" + description + "] " + NameUtils.getSafeName(graph, resource, true) + " copied as " + NameUtils.getSafeName(graph, copy, true));\r
+                    nodeMap.put(resource, null, new IdentifiedElement(copy, null));\r
+                    if (op.copyMap != null)\r
+                        op.copyMap.put(resource, copy);\r
+                    copyProcedure.postCopy(resource, copy);\r
+                }\r
+            }\r
+        });\r
+    }\r
+\r
+    public static class RouteLine extends Tuple2 {\r
+        public RouteLine(Double position, Boolean horizontal) {\r
+            super(position, horizontal);\r
+        }\r
+        public double getPosition() {\r
+            Double pos = (Double) get(0);\r
+            return pos != null ? pos : 0.0;\r
+        }\r
+        public boolean isHorizontal() {\r
+            return Boolean.TRUE.equals(get(1));\r
+        }\r
+    }\r
+\r
+    public static class BranchPoint extends Tuple3 {\r
+        public BranchPoint(AffineTransform at, Boolean horizontal, Boolean vertical) {\r
+            super(at, horizontal, vertical);\r
+        }\r
+        public AffineTransform getTransform() {\r
+            return (AffineTransform) get(0);\r
+        }\r
+    }\r
+\r
+    public static RouteLine readRouteLine(ReadGraph graph, Resource src) throws DatabaseException {\r
+        DiagramResource DIA = DiagramResource.getInstance(graph);\r
+        Double pos = graph.getPossibleRelatedValue(src, DIA.HasPosition, Bindings.DOUBLE);\r
+        Boolean hor = graph.getPossibleRelatedValue(src, DIA.IsHorizontal, Bindings.BOOLEAN);\r
+        return new RouteLine(pos, hor);\r
+    }\r
+\r
+    public static BranchPoint readBranchPoint(ReadGraph graph, Resource src) throws DatabaseException {\r
+        DiagramResource DIA = DiagramResource.getInstance(graph);\r
+        AffineTransform at = DiagramGraphUtil.getTransform(graph, src);\r
+        boolean hor = graph.hasStatement(src, DIA.Horizontal);\r
+        boolean ver = graph.hasStatement(src, DIA.Vertical);\r
+        return new BranchPoint(at, hor, ver);\r
+    }\r
+\r
+    /**\r
+     * @param nodeMap\r
+     * @return\r
+     * @throws Exception\r
+     */\r
+    private NodeMap copyConnections(final NodeMap nodeMap) throws Exception {\r
+        final StructuralResource2 STR = StructuralResource2.getInstance(graph);\r
+        final DiagramResource DIA = DiagramResource.getInstance(graph);\r
+\r
+//        final IModelingRules rules = graph.syncRequest(DiagramRequests.getModelingRules(op.sourceDiagram, null));\r
+//        if (rules == null)\r
+//            throw new IllegalArgumentException("source diagram offers no modeling rules");\r
+\r
+        final CopyAdvisor ca = op.target.getHint(SynchronizationHints.COPY_ADVISOR);\r
+        if (ca == null)\r
+            throw new UnsupportedOperationException("Cannot copy connections, no copy advisor available for diagram "\r
+                    + op.target);\r
+\r
+        forEachResourceElement("Copy Connections", op.ea.connections, new Procedure() {\r
+            @Override\r
+            public void execute(Resource sourceObject) throws DatabaseException {\r
+                copyConnection(sourceObject);\r
+            }\r
+\r
+            private void copyConnection(Resource sourceObject) throws DatabaseException {\r
+                // For associating source<->destination connection parts\r
+                final Map<Object, Object> resourceMap = new THashMap<Object, Object>();\r
+                // For associating source connectors to source nodes \r
+                final StatementMap connectorToNode = new StatementMap();\r
+\r
+                // 1. copy connection\r
+                // - This will also copy interior route nodes\r
+                // - But will leave out the DIA.AreConnected relations between route nodes\r
+                Resource sourceDiagram = graph.getPossibleObject(sourceObject, Layer0.getInstance(graph).PartOf);\r
+                if (sourceDiagram == null)\r
+                    sourceDiagram = OrderedSetUtils.getSingleOwnerList(graph, sourceObject, DIA.Diagram);\r
+                Resource copy = CopyAdvisorUtil.copy(targetContext, graph, ca, sourceObject, sourceDiagram, op.targetDiagram, resourceMap);\r
+                if (copy == null)\r
+                    throw new UnsupportedOperationException("Could not copy connection " + sourceObject);\r
+                OrderedSetUtils.addFirst(graph, op.targetDiagram, copy);\r
+\r
+                graph.deny(copy, MOD.IsTemplatized, copy);\r
+\r
+                AddElement.claimFreshElementName(graph, op.targetDiagram, copy);\r
+\r
+                AddConnection.copyConnectionType(graph, sourceObject, copy);\r
+\r
+                GraphLayerManager glm = targetContext.get(GraphSynchronizationHints.GRAPH_LAYER_MANAGER);\r
+                if (glm != null) {\r
+                    glm.removeFromAllLayers(graph, copy);\r
+                    glm.putElementOnVisibleLayers(op.target, graph, copy);\r
+                }\r
+\r
+                nodeMap.put(sourceObject, null, new IdentifiedElement(copy, null));\r
+                if (op.copyMap != null)\r
+                    op.copyMap.put(sourceObject, copy);\r
+\r
+                // WORKAROUND: CopyAdvisorUtil.copy(..., resourceMap)\r
+                // implementations do not all support filling the resource map.\r
+                // Thus we resort to the old logic if resourceMap is empty at this point.\r
+                final boolean mapResources = resourceMap.isEmpty();\r
+\r
+                // 2. associate source connection parts to destination connection parts\r
+\r
+                // Connectors\r
+                Collection<Statement> sourceHasConnectors = graph.getStatements(sourceObject, DIA.HasConnector);\r
+                MapQueue<Resource, Resource> connectorsByType = new MapQueue<Resource, Resource>();\r
+                for (Statement hasConnector : sourceHasConnectors) {\r
+                    connectorsByType.offer(hasConnector.getPredicate(), hasConnector.getObject());\r
+                    for (Statement connects : graph.getStatements(hasConnector.getObject(), STR.Connects)) {\r
+                        if (!sourceObject.equals(connects.getObject())) {\r
+                            connectorToNode.put(hasConnector.getObject(), connects);\r
+                            break;\r
+                        }\r
+                    }\r
+                }\r
+                if (mapResources) {\r
+                    for (Statement hasConnector : graph.getStatements(copy, DIA.HasConnector)) {\r
+                        Resource srcConnector = connectorsByType.poll(hasConnector.getPredicate());\r
+                        resourceMap.put(srcConnector, hasConnector.getObject());\r
+                    }\r
+                }\r
+                // 2.2. Offset interior route nodes\r
+                Collection<Resource> sourceInteriorRouteNodes = graph.getObjects(sourceObject, DIA.HasInteriorRouteNode);\r
+                if (mapResources) {\r
+                    // WORKAROUND: for cases where resourceMap was not filled by\r
+                    // the copy operation. Still needed because TG copying does\r
+                    // not output this information.\r
+                    Queue<Resource> branchPoints = new ArrayDeque<Resource>(sourceInteriorRouteNodes.size());\r
+                    Queue<Resource> routeLines = new ArrayDeque<Resource>(sourceInteriorRouteNodes.size());\r
+                    for (Resource dst : graph.getObjects(copy, DIA.HasInteriorRouteNode)) {\r
+                        if (graph.isInstanceOf(dst, DIA.BranchPoint))\r
+                            branchPoints.offer(dst);\r
+                        else if (graph.isInstanceOf(dst, DIA.RouteLine))\r
+                            routeLines.offer(dst);\r
+                    }\r
+                    for (Resource src : sourceInteriorRouteNodes) {\r
+                        if (graph.isInstanceOf(src, DIA.BranchPoint)) {\r
+                            Resource dst = branchPoints.poll();\r
+                            resourceMap.put(src, dst);\r
+                            BranchPoint bp = readBranchPoint(graph, src);\r
+                            AffineTransform at = bp.getTransform();\r
+                            at.preConcatenate(offsetTransform);\r
+                            DiagramGraphUtil.setTransform(graph, dst, at);\r
+                        }\r
+                        else if (graph.isInstanceOf(src, DIA.RouteLine)) {\r
+                            Resource dst = routeLines.poll();\r
+                            resourceMap.put(src, dst);\r
+                            RouteLine rl = readRouteLine(graph, src);\r
+                            double newPos = rl.getPosition() + (rl.isHorizontal() ? op.offset.getY() : op.offset.getX());\r
+                            graph.claimLiteral(dst, DIA.HasPosition, newPos, Bindings.DOUBLE);\r
+                        }\r
+                    }\r
+                } else {\r
+                    for (Resource src : sourceInteriorRouteNodes) {\r
+                        Resource dst = (Resource) resourceMap.get(src);\r
+                        if (dst != null) {\r
+                            if (graph.isInstanceOf(src, DIA.BranchPoint)) {\r
+                                BranchPoint bp = readBranchPoint(graph, src);\r
+                                AffineTransform at = bp.getTransform();\r
+                                at.preConcatenate(offsetTransform);\r
+                                DiagramGraphUtil.setTransform(graph, dst, at);\r
+                            } else if (graph.isInstanceOf(src, DIA.RouteLine)) {\r
+                                RouteLine rl = readRouteLine(graph, src);\r
+                                double newPos = rl.getPosition() + (rl.isHorizontal() ? op.offset.getY() : op.offset.getX());\r
+                                graph.claimLiteral(dst, DIA.HasPosition, newPos, Bindings.DOUBLE);\r
+                            }\r
+                        }\r
+                    }\r
+                }\r
+\r
+                // 3. Connect connection parts according to how the source is connected\r
+                for (Resource src : sourceInteriorRouteNodes) {\r
+                    Resource dst = (Resource) resourceMap.get(src);\r
+                    for (Resource connectedToSrc : graph.getObjects(src, DIA.AreConnected)) {\r
+                        Resource connectedToDst = (Resource) resourceMap.get(connectedToSrc);\r
+                        graph.claim(dst, DIA.AreConnected, DIA.AreConnected, connectedToDst);\r
+                    }\r
+                }\r
+                for (Statement hasConnector : sourceHasConnectors) {\r
+                    Resource srcConnector = hasConnector.getObject();\r
+                    Resource dstConnector = (Resource) resourceMap.get(srcConnector);\r
+                    Statement srcConnects = connectorToNode.get(srcConnector);\r
+\r
+                    // Connect to copied nodes\r
+                    IdentifiedElement dstNode = nodeMap.get(srcConnects.getObject());\r
+                    if (dstNode == null)\r
+                        throw new DatabaseException("Source element "\r
+                                + NameUtils.getURIOrSafeNameInternal(graph, srcConnects.getObject())\r
+                                + " not copied causing copying of connection "\r
+                                + NameUtils.getURIOrSafeNameInternal(graph, sourceObject) \r
+                                +" to fail.");\r
+                    graph.claim(dstConnector, srcConnects.getPredicate(), dstNode.getObject());\r
+\r
+                    // Connect to other copied route nodes\r
+                    for (Resource connectedToSrc : graph.getObjects(srcConnector, DIA.AreConnected)) {\r
+                        Resource connectedToDst = (Resource) resourceMap.get(connectedToSrc);\r
+                        graph.claim(dstConnector, DIA.AreConnected, DIA.AreConnected, connectedToDst);\r
+                    }\r
+                }\r
+\r
+                // 4. Make sure MOD.ConnectorToComponent relations are copied as well.\r
+                // Otherwise diagram mapping will do bad things on the model.\r
+                Resource sourceComponent = graph.getPossibleObject(sourceObject, MOD.ElementToComponent);\r
+                if (sourceComponent != null) {\r
+                    for (Statement hasConnector : sourceHasConnectors) {\r
+                        Resource sourceConnector = hasConnector.getObject();\r
+                        Resource targetConnector = (Resource) resourceMap.get(sourceConnector);\r
+                        // Should have been defined back in steps 1-2.\r
+                        assert targetConnector != null;\r
+                        Statement sourceConnectorToComponent = graph.getPossibleStatement(sourceConnector, MOD.ConnectorToComponent);\r
+                        if (sourceConnectorToComponent == null)\r
+                            continue;\r
+                        if (!sourceConnectorToComponent.getObject().equals(sourceComponent))\r
+                            continue;\r
+                        Resource targetComponent = graph.getPossibleObject(copy, MOD.ElementToComponent);\r
+                        if (targetComponent == null)\r
+                            continue;\r
+\r
+                        graph.claim(targetConnector, sourceConnectorToComponent.getPredicate(), targetComponent);\r
+\r
+                        // #6190 & apros:#11435: Ensure that MOD.HasConnectionMappingSpecification is added to target\r
+                        for (Resource connectionMappingSpec : graph.getObjects(sourceConnector, MOD.HasConnectionMappingSpecification))\r
+                            graph.claim(targetConnector, MOD.HasConnectionMappingSpecification, connectionMappingSpec);\r
+                    }\r
+                }\r
+            }\r
+        });\r
+\r
+        return nodeMap;\r
+    }\r
+\r
+    class CopyProcedure {\r
+        Resource copy(Resource source) throws Exception { throw new UnsupportedOperationException(); }\r
+        void postCopy(Resource source, Resource copy) throws Exception {}\r
+    }\r
+\r
+    /**\r
+     * @param judgment <code>null</code> if no judgement is available in which\r
+     *        case defaultValue is always returned\r
+     * @param connectionPoint\r
+     * @param defaultValue\r
+     * @return\r
+     * @throws DatabaseException\r
+     */\r
+    @SuppressWarnings("unused")\r
+    private static Resource getAttachmentRelation(ReadGraph graph, ConnectionJudgement judgment,\r
+            IConnectionPoint connectionPoint, Resource defaultValue) throws DatabaseException {\r
+        if (judgment == null || !(connectionPoint instanceof CPTerminal) || judgment.attachmentRelations == null)\r
+            return defaultValue;\r
+        Resource attachment = judgment.attachmentRelations.get(graph, (CPTerminal) connectionPoint);\r
+        return attachment != null ? attachment : defaultValue;\r
+    }\r
+    \r
+    /**\r
+     * Get node map of copied variables. Map contains original and new resources.\r
+     * \r
+     * @return NodeMap of copied resources or null if copy has not been performed\r
+     */\r
+    public NodeMap getNodeMap() {\r
+        return nodeMap;\r
+    }\r
+\r
+}\r