From ad8333027322fda6b9a8a524c7a7e15a54c52f38 Mon Sep 17 00:00:00 2001
From: Tuukka Lehtonen <tuukka.lehtonen@semantum.fi>
Date: Thu, 1 Sep 2016 14:05:42 +0300
Subject: [PATCH] Sync git svn branch with SVN repository r33158.

refs #6475
---
 .../src/org/simantics/charts/Charts.java                    | 4 ++--
 .../db/layer0/request/PossibleActiveExperiment.java         | 3 ++-
 .../org/simantics/db/layer0/util/DomainProcessorState.java  | 1 +
 .../db/layer0/util/ModelTransferableGraphSource.java        | 4 +++-
 .../db/layer0/util/ModelTransferableGraphSourceRequest.java | 4 +++-
 .../src/org/simantics/db/layer0/variable/Variables.java     | 6 +++---
 .../modeling/mapping/DiagramToCompositeMapping3.java        | 5 +++++
 .../modeling/subscription/SubscriptionItemLabel.java        | 4 ++--
 .../src/org/simantics/structural2/Functions.java            | 4 ++--
 9 files changed, 23 insertions(+), 12 deletions(-)

diff --git a/bundles/org.simantics.charts/src/org/simantics/charts/Charts.java b/bundles/org.simantics.charts/src/org/simantics/charts/Charts.java
index 69aea11ee..dd7ae02a0 100644
--- a/bundles/org.simantics.charts/src/org/simantics/charts/Charts.java
+++ b/bundles/org.simantics.charts/src/org/simantics/charts/Charts.java
@@ -10,8 +10,8 @@ import org.simantics.databoard.binding.error.BindingException;
 import org.simantics.databoard.util.Bean;
 import org.simantics.db.ReadGraph;
 import org.simantics.db.Resource;
+import org.simantics.db.common.request.PossibleIndexRoot;
 import org.simantics.db.exception.DatabaseException;
-import org.simantics.db.layer0.request.PossibleModel;
 import org.simantics.history.HistoryException;
 import org.simantics.history.HistorySamplerItem;
 import org.simantics.history.ItemManager;
@@ -42,7 +42,7 @@ public final class Charts {
 		
 		try {
 
-			Resource model = graph.syncRequest(new PossibleModel(subscriptionItem));
+			Resource model = graph.syncRequest(new PossibleIndexRoot(subscriptionItem));
 			if ( model == null ) {
 				throw new DatabaseException("There is no model for " + subscriptionItem);
 			}
diff --git a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/request/PossibleActiveExperiment.java b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/request/PossibleActiveExperiment.java
index 3db016d79..6caca12c5 100644
--- a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/request/PossibleActiveExperiment.java
+++ b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/request/PossibleActiveExperiment.java
@@ -13,6 +13,7 @@ package org.simantics.db.layer0.request;
 
 import org.simantics.db.ReadGraph;
 import org.simantics.db.Resource;
+import org.simantics.db.common.request.PossibleIndexRoot;
 import org.simantics.db.common.request.ResourceRead;
 import org.simantics.db.exception.DatabaseException;
 import org.simantics.layer0.Layer0;
@@ -27,7 +28,7 @@ public class PossibleActiveExperiment extends ResourceRead<Resource> {
     @Override
     public Resource perform(ReadGraph graph) throws DatabaseException {
 
-    	Resource model = graph.sync(new PossibleModel(resource));
+    	Resource model = graph.sync(new PossibleIndexRoot(resource));
     	if(model == null) return null;
     	
     	Layer0 b = Layer0.getInstance(graph);
diff --git a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/DomainProcessorState.java b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/DomainProcessorState.java
index d4f0dbe01..de8a17c78 100644
--- a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/DomainProcessorState.java
+++ b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/DomainProcessorState.java
@@ -16,6 +16,7 @@ public class DomainProcessorState {
 	public TIntIntHashMap inverses = new TIntIntHashMap();
 	public TIntHashSet externals = new TIntHashSet();
 	public TIntIntHashMap ids = new TIntIntHashMap(100, 0.6f, -1, -1);
+	public TIntHashSet pending = new TIntHashSet();
 
 	public int statementCount;
 	public int valueCount;
diff --git a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSource.java b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSource.java
index 2636bb0d7..79f093748 100644
--- a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSource.java
+++ b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSource.java
@@ -248,7 +248,9 @@ public class ModelTransferableGraphSource implements TransferableGraphSource {
 				int p = state.otherStatementsInput.readInt();
 				int o = state.otherStatementsInput.readInt();
 				if(!exclude) {
-					if(state.excludedShared.contains(o)) {
+					if(state.pending.contains(o)) {
+						System.err.println("excluding garbage statement " + s + " " + p + " " + o + ", object resource is garbage");
+					} else if(state.excludedShared.contains(o)) {
 						System.err.println("excluding shared " + s + " " + p + " " + o);
 					} else {
 						
diff --git a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSourceRequest.java b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSourceRequest.java
index c61fdadcb..d7fe5c690 100644
--- a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSourceRequest.java
+++ b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/util/ModelTransferableGraphSourceRequest.java
@@ -440,8 +440,10 @@ public class ModelTransferableGraphSourceRequest extends UniqueRead<ModelTransfe
 				String uri = graph.getPossibleURI(r);
 				if(uri != null)
 					state.externals.add(transientId);
-				else
+				else {
+					state.pending.add(transientId);
 					System.err.println("Pending status in export: " + NameUtils.getSafeName(graph, r, true) + " (" + graph.getPossibleURI(r) + ")");
+				}
 			}
 		}
 
diff --git a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/variable/Variables.java b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/variable/Variables.java
index 81e1e46e9..e323f4f8c 100644
--- a/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/variable/Variables.java
+++ b/bundles/org.simantics.db.layer0/src/org/simantics/db/layer0/variable/Variables.java
@@ -26,13 +26,13 @@ import org.simantics.databoard.util.URIStringUtils;
 import org.simantics.db.ReadGraph;
 import org.simantics.db.RequestProcessor;
 import org.simantics.db.Resource;
+import org.simantics.db.common.request.PossibleIndexRoot;
 import org.simantics.db.common.request.TernaryRead;
 import org.simantics.db.common.utils.Logger;
 import org.simantics.db.exception.DatabaseException;
 import org.simantics.db.layer0.exception.MissingVariableException;
 import org.simantics.db.layer0.request.Model;
 import org.simantics.db.layer0.request.PossibleActiveVariableFromVariable;
-import org.simantics.db.layer0.request.PossibleModel;
 import org.simantics.db.layer0.request.PossibleVariableIndexRoot;
 import org.simantics.db.layer0.request.PossibleVariableModel;
 import org.simantics.db.layer0.request.PropertyInfo;
@@ -332,7 +332,7 @@ final public class Variables {
 
     public static Variable getPossibleConfigurationContext(ReadGraph graph, Resource resource) throws DatabaseException {
         SimulationResource SIMU = SimulationResource.getInstance(graph);
-        if (!graph.isInstanceOf(resource, SIMU.Model)) resource = graph.sync(new PossibleModel(resource));
+        if (!graph.isInstanceOf(resource, SIMU.Model)) resource = graph.sync(new PossibleIndexRoot(resource));
         if (resource == null)
             return null;
         Resource configurationResource = graph.getPossibleObject(resource, SIMU.HasConfiguration);
@@ -343,7 +343,7 @@ final public class Variables {
 
     public static Variable getPossibleConfigurationContext(ReadGraph graph, Variable variable) throws DatabaseException {
         SimulationResource SIMU = SimulationResource.getInstance(graph);
-        Resource model = getPossibleModel(graph, variable);
+        Resource model = getPossibleIndexRoot(graph, variable);
         if (model == null)
             return null;
         Resource configurationResource = graph.getPossibleObject(model, SIMU.HasConfiguration);
diff --git a/bundles/org.simantics.modeling/src/org/simantics/modeling/mapping/DiagramToCompositeMapping3.java b/bundles/org.simantics.modeling/src/org/simantics/modeling/mapping/DiagramToCompositeMapping3.java
index df54d5426..d44e4c162 100644
--- a/bundles/org.simantics.modeling/src/org/simantics/modeling/mapping/DiagramToCompositeMapping3.java
+++ b/bundles/org.simantics.modeling/src/org/simantics/modeling/mapping/DiagramToCompositeMapping3.java
@@ -237,6 +237,11 @@ public class DiagramToCompositeMapping3 extends MappingBase {
                         bb(DIA.FlagIsJoinedBy, Element, Join)
                         ),
                         deny(bb(STR.Joins, Join, Connection)))
+        ),
+        if_(and(bf(L0.ConsistsOf, Diagram, Element),
+                bf(MOD.DiagramConnectionToConnectionSpecial, Element, Connection),
+                not(b(new Tag(STR.Connects), Connection))),
+                deny(exists(Connection))
         ));
 	}
 	
diff --git a/bundles/org.simantics.modeling/src/org/simantics/modeling/subscription/SubscriptionItemLabel.java b/bundles/org.simantics.modeling/src/org/simantics/modeling/subscription/SubscriptionItemLabel.java
index ac35599c2..ddc333420 100644
--- a/bundles/org.simantics.modeling/src/org/simantics/modeling/subscription/SubscriptionItemLabel.java
+++ b/bundles/org.simantics.modeling/src/org/simantics/modeling/subscription/SubscriptionItemLabel.java
@@ -11,9 +11,9 @@ import org.simantics.databoard.util.URIStringUtils;
 import org.simantics.db.ReadGraph;
 import org.simantics.db.Resource;
 import org.simantics.db.common.procedure.adapter.TransientCacheAsyncListener;
+import org.simantics.db.common.request.PossibleIndexRoot;
 import org.simantics.db.exception.DatabaseException;
 import org.simantics.db.layer0.exception.PendingVariableException;
-import org.simantics.db.layer0.request.PossibleModel;
 import org.simantics.db.layer0.request.PossibleVariableValue;
 import org.simantics.db.layer0.variable.RVI;
 import org.simantics.db.layer0.variable.Variable;
@@ -54,7 +54,7 @@ public class SubscriptionItemLabel {
         if (rvi == null)
             return NO_VARIABLE_ID;
 
-        Resource model = graph.syncRequest(new PossibleModel(item));
+        Resource model = graph.syncRequest(new PossibleIndexRoot(item));
         if (model != null) {
             ModelContexts contexts = graph.syncRequest(new ModelContextsRequest(model), TransientCacheAsyncListener.<ModelContexts>instance());
             Variable configurationContext = contexts.getConfigurationContext();
diff --git a/bundles/org.simantics.structural2/src/org/simantics/structural2/Functions.java b/bundles/org.simantics.structural2/src/org/simantics/structural2/Functions.java
index 70b9ab039..fd4012355 100644
--- a/bundles/org.simantics.structural2/src/org/simantics/structural2/Functions.java
+++ b/bundles/org.simantics.structural2/src/org/simantics/structural2/Functions.java
@@ -26,12 +26,12 @@ import org.simantics.db.common.issue.StandardIssue;
 import org.simantics.db.common.procedure.adapter.TransientCacheAsyncListener;
 import org.simantics.db.common.procedure.adapter.TransientCacheListener;
 import org.simantics.db.common.request.ObjectsWithType;
+import org.simantics.db.common.request.PossibleIndexRoot;
 import org.simantics.db.common.request.ResourceRead;
 import org.simantics.db.common.uri.UnescapedChildMapOfResource;
 import org.simantics.db.exception.DatabaseException;
 import org.simantics.db.layer0.function.All;
 import org.simantics.db.layer0.function.StandardChildDomainChildren;
-import org.simantics.db.layer0.request.PossibleModel;
 import org.simantics.db.layer0.request.PropertyInfo;
 import org.simantics.db.layer0.request.PropertyInfoRequest;
 import org.simantics.db.layer0.request.VariableRead;
@@ -372,7 +372,7 @@ public class Functions {
 
 			Layer0 L0 = Layer0.getInstance(graph);
 			SimulationResource SIMU = SimulationResource.getInstance(graph);
-			Resource model = graph.sync(new PossibleModel(resource));
+			Resource model = graph.sync(new PossibleIndexRoot(resource));
 			if(graph.isInstanceOf(model, L0.RVIContext)) {
 				return fromContext(graph, model);
 			}
-- 
2.43.2